RNA–Protein interactions for RNA: ENST00000533507.5

NDUFS3-211, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-211ENST00000533507 KIFC2Q96AC6 838 aa30.64■■■□□ 2.5
NDUFS3-211ENST00000533507 RIOX1Q9H6W3 641 aa30.64■■■□□ 2.5
NDUFS3-211ENST00000533507 MKRN3Q13064 507 aaKnown RBP30.64■■■□□ 2.49
NDUFS3-211ENST00000533507 PPIL2Q13356 520 aa30.64■■■□□ 2.49
NDUFS3-211ENST00000533507 TRIM29Q14134 588 aa30.64■■■□□ 2.49
NDUFS3-211ENST00000533507 RPAP3Q9H6T3 665 aaPredicted RBP30.64■■■□□ 2.49
NDUFS3-211ENST00000533507 GJB4Q9NTQ9 266 aa30.64■■■□□ 2.49
NDUFS3-211ENST00000533507 RBM27Q9P2N5 1060 aaKnown RBP30.64■■■□□ 2.49
NDUFS3-211ENST00000533507 CIZ1Q9ULV3 898 aaPredicted RBP30.64■■■□□ 2.49
NDUFS3-211ENST00000533507 TRPM7Q96QT4 1865 aa30.64■■■□□ 2.49
NDUFS3-211ENST00000533507 MYH6P13533 1939 aa30.63■■■□□ 2.49
NDUFS3-211ENST00000533507 NUCB2P80303 420 aa30.63■■■□□ 2.49
NDUFS3-211ENST00000533507 SYDE2Q5VT97 1194 aa30.63■■■□□ 2.49
NDUFS3-211ENST00000533507 OTUD7BQ6GQQ9 843 aa30.63■■■□□ 2.49
NDUFS3-211ENST00000533507 CHURC1Q8WUH1 139 aa30.63■■■□□ 2.49
NDUFS3-211ENST00000533507 JMJD4Q9H9V9 463 aa30.63■■■□□ 2.49
NDUFS3-211ENST00000533507 PKN1Q16512 942 aa30.62■■■□□ 2.49
NDUFS3-211ENST00000533507 GADL1Q6ZQY3 521 aa30.62■■■□□ 2.49
NDUFS3-211ENST00000533507 FEM1BQ9UK73 627 aa30.62■■■□□ 2.49
NDUFS3-211ENST00000533507 PASKQ96RG2 1323 aa30.62■■■□□ 2.49
NDUFS3-211ENST00000533507 SCG2P13521 617 aa30.61■■■□□ 2.49
NDUFS3-211ENST00000533507 SNAP25P60880 206 aa30.61■■■□□ 2.49
NDUFS3-211ENST00000533507 FBXO28Q9NVF7 368 aa30.61■■■□□ 2.49
NDUFS3-211ENST00000533507 XBP1P17861 261 aa30.61■■■□□ 2.49
NDUFS3-211ENST00000533507 PFKFB3Q16875 520 aaPredicted RBP30.61■■■□□ 2.49
NDUFS3-211ENST00000533507 HEATR3Q7Z4Q2 680 aa30.61■■■□□ 2.49
NDUFS3-211ENST00000533507 GPKOWQ92917 476 aaPredicted RBP eCLIP30.61■■■□□ 2.495e-7■■■□□ 19
NDUFS3-211ENST00000533507 CXCL11O14625 94 aa30.6■■■□□ 2.49
NDUFS3-211ENST00000533507 FLOT1O75955 427 aa30.6■■■□□ 2.49
NDUFS3-211ENST00000533507 VPS54Q9P1Q0 977 aa30.6■■■□□ 2.49
NDUFS3-211ENST00000533507 PRR12Q9ULL5 1215 aa30.6■■■□□ 2.49
NDUFS3-211ENST00000533507 SH3D19Q5HYK7 790 aa30.59■■■□□ 2.49
NDUFS3-211ENST00000533507 FAM160B2Q86V87 743 aa30.59■■■□□ 2.49
NDUFS3-211ENST00000533507 C12orf42Q96LP6 360 aa30.59■■■□□ 2.49
NDUFS3-211ENST00000533507 WDR33Q9C0J8 1336 aaKnown RBP30.59■■■□□ 2.49
NDUFS3-211ENST00000533507 GJA5P36382 358 aa30.59■■■□□ 2.49
NDUFS3-211ENST00000533507 MCTP1Q6DN14 999 aa30.59■■■□□ 2.49
NDUFS3-211ENST00000533507 BTNL9Q6UXG8 535 aa30.59■■■□□ 2.49
NDUFS3-211ENST00000533507 WNK4Q96J92 1243 aa30.58■■■□□ 2.49
NDUFS3-211ENST00000533507 ABT1Q9ULW3 272 aaKnown RBP30.58■■■□□ 2.49
NDUFS3-211ENST00000533507 A0A0G2JLL6 359 aaPredicted RBP30.57■■■□□ 2.48
NDUFS3-211ENST00000533507 CDC37Q16543 378 aaPredicted RBP30.57■■■□□ 2.48
NDUFS3-211ENST00000533507 PRRT2Q7Z6L0 340 aaPredicted RBP30.57■■■□□ 2.48
NDUFS3-211ENST00000533507 SLF1Q9BQI6 1058 aa30.57■■■□□ 2.48
NDUFS3-211ENST00000533507 KCNJ14Q9UNX9 436 aa30.57■■■□□ 2.48
NDUFS3-211ENST00000533507 KCNH4Q9UQ05 1017 aa30.57■■■□□ 2.48
NDUFS3-211ENST00000533507 MTMR6Q9Y217 621 aa30.57■■■□□ 2.48
NDUFS3-211ENST00000533507 PNMA6FA0A0J9YX94 578 aa30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 ZBTB5O15062 677 aa30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 PDIA4P13667 645 aaKnown RBP30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 ZNF157P51786 506 aaPredicted RBP30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 SNAPC2Q13487 334 aa30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 KRT40Q6A162 431 aa30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 FBXO18Q8NFZ0 1043 aa30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 TREML2Q5T2D2 321 aa30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 SAPCD2Q86UD0 394 aa30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 FERMT3Q86UX7 667 aa30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 PRPF38AQ8NAV1 312 aaKnown RBP30.56■■■□□ 2.48
NDUFS3-211ENST00000533507 ZSCAN22P10073 491 aaPredicted RBP30.55■■■□□ 2.48
NDUFS3-211ENST00000533507 QRICH1Q2TAL8 776 aa30.55■■■□□ 2.48
NDUFS3-211ENST00000533507 WWC2Q6AWC2 1192 aa30.55■■■□□ 2.48
NDUFS3-211ENST00000533507 ZDHHC9Q9Y397 364 aa30.55■■■□□ 2.48
NDUFS3-211ENST00000533507 CTDP1Q9Y5B0 961 aaPredicted RBP30.55■■■□□ 2.48
NDUFS3-211ENST00000533507 PLA2G6O60733 806 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 BRD1O95696 1058 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 CCDC174Q6PII3 467 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 COA7Q96BR5 231 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L15C9J2P7 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L13C9JLJ4 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L11C9JVI0 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L18D6R9N7 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L22D6RA61 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L17D6RBQ6 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L19D6RCP7 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L20D6RJB6 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 NLRP5P59047 1200 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 USP17L24Q0WX57 530 aa30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 GNL2Q13823 731 aaKnown RBP30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 FASTKD5Q7L8L6 764 aaKnown RBP30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 PROCA1Q8NCQ7 364 aaPredicted RBP30.54■■■□□ 2.48
NDUFS3-211ENST00000533507 TMEM88BA6NKF7 163 aa30.53■■■□□ 2.48
NDUFS3-211ENST00000533507 NAPAP54920 295 aa30.53■■■□□ 2.48
NDUFS3-211ENST00000533507 FSTL1Q12841 308 aa30.53■■■□□ 2.48
NDUFS3-211ENST00000533507 FOXD4L6Q3SYB3 417 aaPredicted RBP30.53■■■□□ 2.48
NDUFS3-211ENST00000533507 FOXD4L3Q6VB84 417 aaPredicted RBP30.53■■■□□ 2.48
NDUFS3-211ENST00000533507 CATSPERGQ6ZRH7 1159 aa30.53■■■□□ 2.48
NDUFS3-211ENST00000533507 MTMR8Q96EF0 704 aa30.53■■■□□ 2.48
NDUFS3-211ENST00000533507 BARHL2Q9NY43 387 aa30.53■■■□□ 2.48
NDUFS3-211ENST00000533507 SAFBQ15424 915 aaKnown RBP eCLIP30.52■■■□□ 2.48
NDUFS3-211ENST00000533507 USH1GQ495M9 461 aa30.52■■■□□ 2.48
NDUFS3-211ENST00000533507 SPRYD7Q5W111 196 aa30.52■■■□□ 2.48
NDUFS3-211ENST00000533507 PPP1R9AQ9ULJ8 1098 aa30.52■■■□□ 2.48
NDUFS3-211ENST00000533507 PTPRFP10586 1907 aa30.52■■■□□ 2.48
NDUFS3-211ENST00000533507 GTF2A2P52657 109 aa30.51■■■□□ 2.48
NDUFS3-211ENST00000533507 COG2Q14746 738 aa30.51■■■□□ 2.48
NDUFS3-211ENST00000533507 RGMBQ6NW40 437 aa30.51■■■□□ 2.48
NDUFS3-211ENST00000533507 FBXO11Q86XK2 927 aa30.51■■■□□ 2.47
NDUFS3-211ENST00000533507 STXBP3O00186 592 aa30.5■■■□□ 2.47
NDUFS3-211ENST00000533507 PPP1R11O60927 126 aaPredicted RBP30.5■■■□□ 2.47
NDUFS3-211ENST00000533507 F13A1P00488 732 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms