RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 EAF2Q96CJ1 260 aaPredicted RBP9.73□□□□□ -0.85
NEDD8-207ENST00000533242 GBP4Q96PP9 640 aa9.73□□□□□ -0.85
NEDD8-207ENST00000533242 CRNKL1Q9BZJ0 848 aaKnown RBP9.73□□□□□ -0.85
NEDD8-207ENST00000533242 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
NEDD8-207ENST00000533242 DIS3Q9Y2L1 958 aaKnown RBP9.73□□□□□ -0.85
NEDD8-207ENST00000533242 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 RAG1P15918 1043 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 NEK4P51957 841 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 KIAA1755Q5JYT7 1200 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 CLEC17AQ6ZS10 378 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 ATG4CQ96DT6 458 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 TSEN34Q9BSV6 310 aaKnown RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 SH2D4AQ9H788 454 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 ARHGEF10LQ9HCE6 1279 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 BAZ2AQ9UIF9 1905 aaKnown RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 A0A1W2PQ45 241 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 A0A1W2PQY0 241 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 WDR46O15213 610 aaKnown RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 FLOT1O75955 427 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 L1TD1Q5T7N2 865 aaKnown RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 NOL8Q76FK4 1167 aaKnown RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 TOX2Q96NM4 488 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 MMP19Q99542 508 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 RRAGDQ9NQL2 400 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-207ENST00000533242 MCM9Q9NXL9 1143 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 TMX2Q9Y320 296 aa9.72□□□□□ -0.85
NEDD8-207ENST00000533242 TNFRSF10AO00220 468 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 COPB2P35606 906 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 GRIN2CQ14957 1233 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 TTF1Q15361 905 aaPredicted RBP9.71□□□□□ -0.85
NEDD8-207ENST00000533242 ANKRD33Q7Z3H0 272 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 RIOX2Q8IUF8 465 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 TINF2Q9BSI4 451 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 UPF3BQ9BZI7 483 aaKnown RBP9.71□□□□□ -0.85
NEDD8-207ENST00000533242 VCPKMTQ9H867 229 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 TMEM39AQ9NV64 488 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 ADAMTS5Q9UNA0 930 aa9.71□□□□□ -0.85
NEDD8-207ENST00000533242 MYH7P12883 1935 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 ST18O60284 1047 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 PQBP1O60828 265 aaKnown RBP9.71□□□□□ -0.86
NEDD8-207ENST00000533242 PGK1P00558 417 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 AKR1A1P14550 325 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 DNAJB2P25686 324 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 TMEM132BQ14DG7 1078 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 ZNF792Q3KQV3 632 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 SIAH1Q8IUQ4 282 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 TMX3Q96JJ7 454 aa9.71□□□□□ -0.86
NEDD8-207ENST00000533242 DCDC2CA8MYV0 355 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 ZNF865P0CJ78 1059 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-207ENST00000533242 PDE6AP16499 860 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 EVX2Q03828 476 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-207ENST00000533242 MCTP1Q6DN14 999 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 ERC1Q8IUD2 1116 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 USP38Q8NB14 1042 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 FOXD4L4Q8WXT5 416 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-207ENST00000533242 GRPEL1Q9HAV7 217 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 GREB1LQ9C091 1923 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-207ENST00000533242 ADAMTS4O75173 837 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 CYP2D6P10635 497 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 TAL1P17542 331 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-207ENST00000533242 ICA1Q05084 483 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 FAAP100Q0VG06 881 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 KCTD2Q14681 263 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 CCDC174Q6PII3 467 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 AACSQ86V21 672 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 MSL3Q8N5Y2 521 aaKnown RBP9.7□□□□□ -0.86
NEDD8-207ENST00000533242 SLC44A5Q8NCS7 719 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 GBF1Q92538 1859 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 TIFAQ96CG3 184 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 CCDC17Q96LX7 622 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 ZNF576Q9H609 170 aa9.7□□□□□ -0.86
NEDD8-207ENST00000533242 DCP1AQ9NPI6 582 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-207ENST00000533242 LAMA3Q16787 3333 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 MOXD2PA6NHM9 499 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 TIMP1P01033 207 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 PGK2P07205 417 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 AKR1B1P15121 316 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 COL9A1P20849 921 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 ACLYP53396 1101 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 PPIGQ13427 754 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEDD8-207ENST00000533242 AKNAD1Q5T1N1 836 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 SLC9C2Q5TAH2 1124 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 SPICE1Q8N0Z3 855 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 KLHDC9Q8NEP7 349 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEDD8-207ENST00000533242 NUP133Q8WUM0 1156 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 KIF1BPQ96EK5 621 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 STARD7Q9NQZ5 370 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 CNPY2Q9Y2B0 182 aa9.69□□□□□ -0.86
NEDD8-207ENST00000533242 TCRBV5S4A2TA0A5A2 114 aa9.68□□□□□ -0.86
NEDD8-207ENST00000533242 DTNBO60941 627 aa9.68□□□□□ -0.86
NEDD8-207ENST00000533242 RAB11FIP3O75154 756 aa9.68□□□□□ -0.86
NEDD8-207ENST00000533242 STAT3P40763 770 aa9.68□□□□□ -0.86
NEDD8-207ENST00000533242 CLEC10AQ8IUN9 316 aa9.68□□□□□ -0.86
NEDD8-207ENST00000533242 LCORLQ8N3X6 602 aa9.68□□□□□ -0.86
NEDD8-207ENST00000533242 ATXN2LQ8WWM7 1075 aaKnown RBP9.68□□□□□ -0.86
NEDD8-207ENST00000533242 DYNLL2Q96FJ2 89 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms