RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 ARFGAP2Q8N6H7 521 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 CCDC17Q96LX7 622 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 SRP68Q9UHB9 627 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 GNA14O95837 355 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 USP17L8P0C7I0 530 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 SFMBT2Q5VUG0 894 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 GPATCH4Q5T3I0 446 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 NBPF11Q86T75 865 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 GPIHBP1Q8IV16 184 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 RSPH14Q9UHP6 348 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 MAN1B1Q9UKM7 699 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 COL3A1P02461 1466 aaPredicted RBP17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 CCDC169A6NNP5 214 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 COPB1P53618 953 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 ICA1Q05084 483 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 GRAMD1CQ8IYS0 662 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 ENOX1Q8TC92 643 aaKnown RBP17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 UBE2Q2Q8WVN8 375 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 ATRIPQ8WXE1 791 aa17.01■□□□□ 0.31
PCDHA3-202ENST00000532566 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
PCDHA3-202ENST00000532566 AK8Q96MA6 479 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17■□□□□ 0.31
PCDHA3-202ENST00000532566 NT5C2P49902 561 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 SCARF1Q14162 830 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 ALX1Q15699 326 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 FAM182BQ5T319 152 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 SMAP1Q8IYB5 467 aaPredicted RBP17■□□□□ 0.31
PCDHA3-202ENST00000532566 GPR161Q8N6U8 529 aaKnown RBP17■□□□□ 0.31
PCDHA3-202ENST00000532566 EXOC3O60645 756 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 FLOT1O75955 427 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
PCDHA3-202ENST00000532566 MTUS1Q9ULD2 1270 aa17■□□□□ 0.31
PCDHA3-202ENST00000532566 TMEM131LA2VDJ0 1609 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 PRR16Q569H4 304 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 SLFN13Q68D06 897 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 CCDC26Q8TAB7 109 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 PDLIM2Q96JY6 352 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 MTA3Q9BTC8 594 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 HAUS4Q9H6D7 363 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 SLC39A2Q9NP94 309 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 PICK1Q9NRD5 415 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 SAR1BQ9Y6B6 198 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 NEDD4P46934 1319 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 STK36Q9NRP7 1315 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 SPATA31D1Q6ZQQ2 1576 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 DKC1O60832 514 aaKnown RBP eCLIP16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 GJC1P36383 396 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 CCDC77Q9BR77 488 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 DDX39AO00148 427 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 FAM26FQ5R3K3 315 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 STOX1Q6ZVD7 989 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 FBXO11Q86XK2 927 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 FNBP1Q96RU3 617 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 NAP1L3Q99457 506 aaPredicted RBP16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 TRPC5Q9UL62 973 aaPredicted RBP16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 PCDHA1Q9Y5I3 950 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 GAS7O60861 476 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 NSMFQ6X4W1 530 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 SLFN12Q8IYM2 578 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 FAM76AQ8TAV0 307 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 MTRF1LQ9UGC7 380 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
PCDHA3-202ENST00000532566 MYCLP12524 364 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 GRAPQ13588 217 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 GRAPLQ8TC17 118 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 RPGRIP1Q96KN7 1286 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 PPP1R13BQ96KQ4 1090 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 TSKSQ9UJT2 592 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 EXOC7Q9UPT5 735 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 RIPOR2Q9Y4F9 1068 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 NF2P35240 595 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 BIRC3Q13489 604 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 WHAMMP3Q1A5X7 153 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 MAEAQ7L5Y9 396 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 TPH2Q8IWU9 490 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 SMYD4Q8IYR2 804 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 KIFC2Q96AC6 838 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 FAM212AQ96EL1 285 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 PSMB7Q99436 277 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 SWAP70Q9UH65 585 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 PPEF1O14829 653 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 SARM1Q6SZW1 724 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 DYNLL2Q96FJ2 89 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 EPN1Q9Y6I3 576 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 ITSN1Q15811 1721 aa16.98■□□□□ 0.31
PCDHA3-202ENST00000532566 EFCAB8A8MWE9 144 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms