RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ZNF18P17022 549 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
NXF1-211ENST00000531709 RAD51AP2Q09MP3 1159 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 ZNF658Q5TYW1 1059 aaPredicted RBP12.69□□□□□ -0.38
NXF1-211ENST00000531709 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 HAUS4Q9H6D7 363 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 SLC39A2Q9NP94 309 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 GSPT2Q8IYD1 628 aaKnown RBP12.69□□□□□ -0.38
NXF1-211ENST00000531709 SECISBP2LQ93073 1101 aaKnown RBP12.69□□□□□ -0.38
NXF1-211ENST00000531709 RWDD2AQ9UIY3 292 aa12.69□□□□□ -0.38
NXF1-211ENST00000531709 FAM170AA1A519 330 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 BAG3O95817 575 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 GNAQP50148 359 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
NXF1-211ENST00000531709 HLTFQ14527 1009 aaKnown RBP eCLIP12.68□□□□□ -0.38
NXF1-211ENST00000531709 TMEM266Q2M3C6 531 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 SND1Q7KZF4 910 aaKnown RBP eCLIP12.68□□□□□ -0.38
NXF1-211ENST00000531709 CABP7Q86V35 215 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 USP17L8P0C7I0 530 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 CXCR5P32302 372 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 ACTN2P35609 894 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
NXF1-211ENST00000531709 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 SRBD1Q8N5C6 995 aaKnown RBP12.68□□□□□ -0.38
NXF1-211ENST00000531709 NOA1Q8NC60 698 aaKnown RBP12.68□□□□□ -0.38
NXF1-211ENST00000531709 PNKPQ96T60 521 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 FUT8Q9BYC5 575 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
NXF1-211ENST00000531709 ZEB2O60315 1214 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 TUBBP07437 444 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 DPYDQ12882 1025 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 SMIM5Q71RC9 77 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 MAPKAPK5Q8IW41 473 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 EXOC4Q96A65 974 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 SETDB2Q96T68 719 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 TSG101Q99816 390 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
NXF1-211ENST00000531709 LUC7LQ9NQ29 371 aaKnown RBP12.68□□□□□ -0.38
NXF1-211ENST00000531709 SHTN1A0MZ66 631 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 ODF2Q5BJF6 829 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 TTC19Q6DKK2 380 aaPredicted RBP12.67□□□□□ -0.38
NXF1-211ENST00000531709 GOLGA5Q8TBA6 731 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 TGFBRAP1Q8WUH2 860 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 TNS3Q68CZ2 1445 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 WTIPA6NIX2 430 aaPredicted RBP12.67□□□□□ -0.38
NXF1-211ENST00000531709 LDHBP07195 334 aaKnown RBP12.67□□□□□ -0.38
NXF1-211ENST00000531709 NOP2P46087 812 aaKnown RBP12.67□□□□□ -0.38
NXF1-211ENST00000531709 TNNI2P48788 182 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 DNM2P50570 870 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 IFIH1Q9BYX4 1025 aaKnown RBP12.67□□□□□ -0.38
NXF1-211ENST00000531709 TBC1D7Q9P0N9 293 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 PPP1R3GB7ZBB8 358 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 ZRANB2O95218 330 aaKnown RBP eCLIP12.67□□□□□ -0.387e-6■■■□□ 15
NXF1-211ENST00000531709 PRDX5P30044 214 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 TBX2Q13207 712 aaPredicted RBP12.67□□□□□ -0.38
NXF1-211ENST00000531709 RRAGAQ7L523 313 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 ADGRA1Q86SQ6 560 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 FAM76AQ8TAV0 307 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 PHF20Q9BVI0 1012 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 ZNF287Q9HBT7 754 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 C6orf50Q9HD87 102 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 BCCIPQ9P287 314 aaKnown RBP eCLIP12.67□□□□□ -0.38
NXF1-211ENST00000531709 BIN2Q9UBW5 565 aaPredicted RBP12.67□□□□□ -0.38
NXF1-211ENST00000531709 RGPD2P0DJD1 1756 aa12.67□□□□□ -0.38
NXF1-211ENST00000531709 USP17L3A6NCW0 530 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 USP17L4A6NCW7 530 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 DDAH1O94760 285 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 ERFEQ4G0M1 354 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 USP17L1Q7RTZ2 530 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 TAF4BQ92750 862 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 GOLGA6CA6NDK9 693 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 GOLGA6BA6NDN3 693 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 F8W031 263 aaPredicted RBP12.66□□□□□ -0.38
NXF1-211ENST00000531709 RNF40O75150 1001 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 KIAA0754O94854 1291 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 GOLGA6DP0CG33 693 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 IBSPP21815 317 aaPredicted RBP12.66□□□□□ -0.38
NXF1-211ENST00000531709 LONP1P36776 959 aaKnown RBP12.66□□□□□ -0.38
NXF1-211ENST00000531709 SIK1P57059 783 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 RASGRP2Q7LDG7 609 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
NXF1-211ENST00000531709 RAB34Q9BZG1 259 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 GOLGA6AQ9NYA3 693 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 GOLGA6L10A6NI86 522 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 ABL1P00519 1130 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 SARSP49591 514 aaKnown RBP12.66□□□□□ -0.38
NXF1-211ENST00000531709 RPS8P62241 208 aaKnown RBP12.66□□□□□ -0.38
NXF1-211ENST00000531709 MECOMQ03112 1051 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 C2orf54Q08AI8 447 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 PICALMQ13492 652 aa12.66□□□□□ -0.38
NXF1-211ENST00000531709 PTPROQ16827 1216 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms