RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FAM196AQ6ZSG2 479 aa8.51□□□□□ -1.05
PTPRK-220ENST00000531466 TMEFF1Q8IYR6 380 aa8.51□□□□□ -1.05
PTPRK-220ENST00000531466 SYT8Q8NBV8 401 aa8.51□□□□□ -1.05
PTPRK-220ENST00000531466 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPRK-220ENST00000531466 GPR55Q9Y2T6 319 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-220ENST00000531466 PCDHB14Q9Y5E9 798 aa8.51□□□□□ -1.05
PTPRK-220ENST00000531466 ZNF512BQ96KM6 892 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-220ENST00000531466 PRDM14Q9GZV8 571 aa8.5□□□□□ -1.05
PTPRK-220ENST00000531466 BRMS1Q9HCU9 246 aa8.5□□□□□ -1.05
PTPRK-220ENST00000531466 GMIPQ9P107 970 aa8.5□□□□□ -1.05
PTPRK-220ENST00000531466 VTI1BQ9UEU0 232 aa8.5□□□□□ -1.05
PTPRK-220ENST00000531466 TAF6LQ9Y6J9 622 aa8.5□□□□□ -1.05
PTPRK-220ENST00000531466 FADS2P1A8MWK0 482 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 PATL2C9JE40 543 aaKnown RBP8.49□□□□□ -1.05
PTPRK-220ENST00000531466 MPOP05164 745 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 KRTAP10-2P60368 255 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 CWF19L2Q2TBE0 894 aaKnown RBP8.49□□□□□ -1.05
PTPRK-220ENST00000531466 HSF5Q4G112 596 aaPredicted RBP8.49□□□□□ -1.05
PTPRK-220ENST00000531466 OVOS1Q6IE37 1185 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 GALNT18Q6P9A2 607 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 SND1Q7KZF4 910 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTPRK-220ENST00000531466 TMC6Q7Z403 805 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 PRRT2Q7Z6L0 340 aaPredicted RBP8.49□□□□□ -1.05
PTPRK-220ENST00000531466 FCRL2Q96LA5 508 aaPredicted RBP8.49□□□□□ -1.05
PTPRK-220ENST00000531466 KBTBD4Q9NVX7 518 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 KLHL14Q9P2G3 628 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 TNFRSF10DQ9UBN6 386 aa8.49□□□□□ -1.05
PTPRK-220ENST00000531466 MEIS1O00470 390 aa8.48□□□□□ -1.05
PTPRK-220ENST00000531466 ABLIM1O14639 778 aa8.48□□□□□ -1.05
PTPRK-220ENST00000531466 SIGLEC6O43699 453 aa8.48□□□□□ -1.05
PTPRK-220ENST00000531466 SORBS3O60504 671 aa8.48□□□□□ -1.05
PTPRK-220ENST00000531466 FAM129CQ86XR2 697 aa8.48□□□□□ -1.05
PTPRK-220ENST00000531466 IGDCC3Q8IVU1 814 aa8.48□□□□□ -1.05
PTPRK-220ENST00000531466 TRAIPQ9BWF2 469 aa8.48□□□□□ -1.05
PTPRK-220ENST00000531466 NUDT19A8MXV4 375 aa8.47□□□□□ -1.05
PTPRK-220ENST00000531466 RAB3GAP1Q15042 981 aa8.47□□□□□ -1.05
PTPRK-220ENST00000531466 DBX2Q6ZNG2 339 aa8.47□□□□□ -1.05
PTPRK-220ENST00000531466 LDHDQ86WU2 507 aa8.47□□□□□ -1.05
PTPRK-220ENST00000531466 ADAM7Q9H2U9 754 aa8.47□□□□□ -1.05
PTPRK-220ENST00000531466 MRS2Q9HD23 443 aa8.47□□□□□ -1.05
PTPRK-220ENST00000531466 COPRSQ9NQ92 184 aa8.47□□□□□ -1.05
PTPRK-220ENST00000531466 CHST7Q9NS84 486 aa8.47□□□□□ -1.05
PTPRK-220ENST00000531466 WTIPA6NIX2 430 aaPredicted RBP8.46□□□□□ -1.06
PTPRK-220ENST00000531466 CLEC3AO75596 197 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 CELA3BP08861 270 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 PRKCAP17252 672 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 ARL4AP40617 200 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 NCKAP1LP55160 1127 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 TAGLNQ01995 201 aaKnown RBP8.46□□□□□ -1.06
PTPRK-220ENST00000531466 FBXL19Q6PCT2 694 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 FBXO33Q7Z6M2 555 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 SP8Q8IXZ3 490 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 CDADC1Q9BWV3 514 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 ERVK13-1Q9NX77 482 aa8.46□□□□□ -1.06
PTPRK-220ENST00000531466 RAD51AP2Q09MP3 1159 aa8.45□□□□□ -1.06
PTPRK-220ENST00000531466 LAPTM5Q13571 262 aa8.45□□□□□ -1.06
PTPRK-220ENST00000531466 DNAJC14Q6Y2X3 702 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-220ENST00000531466 NUP43Q8NFH3 380 aa8.45□□□□□ -1.06
PTPRK-220ENST00000531466 PWWP2AQ96N64 755 aa8.45□□□□□ -1.06
PTPRK-220ENST00000531466 LRRC3Q9BY71 257 aa8.45□□□□□ -1.06
PTPRK-220ENST00000531466 ATE1O95260 518 aa8.44□□□□□ -1.06
PTPRK-220ENST00000531466 CYP4F8P98187 520 aa8.44□□□□□ -1.06
PTPRK-220ENST00000531466 CDCP2Q5VXM1 449 aa8.44□□□□□ -1.06
PTPRK-220ENST00000531466 SLCO6A1Q86UG4 719 aa8.44□□□□□ -1.06
PTPRK-220ENST00000531466 ATG4CQ96DT6 458 aa8.44□□□□□ -1.06
PTPRK-220ENST00000531466 CNNM2Q9H8M5 875 aa8.44□□□□□ -1.06
PTPRK-220ENST00000531466 GFOD1Q9NXC2 390 aa8.44□□□□□ -1.06
PTPRK-220ENST00000531466 CTSKP43235 329 aa8.43□□□□□ -1.06
PTPRK-220ENST00000531466 CRKP46108 304 aa8.43□□□□□ -1.06
PTPRK-220ENST00000531466 MKRN2Q9H000 416 aaKnown RBP8.43□□□□□ -1.06
PTPRK-220ENST00000531466 PCDHA5Q9Y5H7 936 aa8.43□□□□□ -1.06
PTPRK-220ENST00000531466 BUB1BO60566 1050 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-220ENST00000531466 ZNF205O95201 554 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 CEBPAP49715 358 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-220ENST00000531466 NFKB2Q00653 900 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 TMEM62Q0P6H9 643 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 ERICH6BQ5W0A0 696 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 RPTNQ6XPR3 784 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 NLRC3Q7RTR2 1065 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 ERMP1Q7Z2K6 904 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 GGNQ86UU5 652 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 LINC01356Q8N9X3 169 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 TP53I13Q8NBR0 393 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-220ENST00000531466 TNFRSF12AQ9NP84 129 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 LUC7LQ9NQ29 371 aaKnown RBP8.42□□□□□ -1.06
PTPRK-220ENST00000531466 AP5S1Q9NUS5 200 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 IMPACTQ9P2X3 320 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 FBXL21Q9UKT6 434 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 SUPT16HQ9Y5B9 1047 aaKnown RBP8.42□□□□□ -1.06
PTPRK-220ENST00000531466 ROBO2Q9HCK4 1378 aa8.42□□□□□ -1.06
PTPRK-220ENST00000531466 GREM1O60565 184 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 BMP8BP34820 402 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 EIF4A3P38919 411 aaKnown RBP8.41□□□□□ -1.06
PTPRK-220ENST00000531466 CRTC3Q6UUV7 619 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 TMEM192Q8IY95 271 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 TEPSINQ96N21 525 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 JMJD8Q96S16 334 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 ANTXR1Q9H6X2 564 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 EHMT1Q9H9B1 1298 aa8.41□□□□□ -1.06
PTPRK-220ENST00000531466 KCNQ5Q9NR82 932 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms