RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 WDR63Q8IWG1 891 aa10.13□□□□□ -0.79
CD44-232ENST00000531118 HERVK_113Q902F9 699 aa10.13□□□□□ -0.79
CD44-232ENST00000531118 NOL10Q9BSC4 688 aaKnown RBP10.13□□□□□ -0.79
CD44-232ENST00000531118 SPATC1LQ9H0A9 340 aa10.13□□□□□ -0.79
CD44-232ENST00000531118 KIAA1683Q9H0B3 1180 aa10.13□□□□□ -0.79
CD44-232ENST00000531118 AATFQ9NY61 560 aaKnown RBP eCLIP10.13□□□□□ -0.79
CD44-232ENST00000531118 SLC5A4Q9NY91 659 aa10.13□□□□□ -0.79
CD44-232ENST00000531118 HMG20BQ9P0W2 317 aa10.13□□□□□ -0.79
CD44-232ENST00000531118 PA2G4Q9UQ80 394 aaKnown RBP10.13□□□□□ -0.79
CD44-232ENST00000531118 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 SYNRGQ9UMZ2 1314 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 A0A1B0GUL7 405 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 STRNO43815 780 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 HLA-DOAP06340 250 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 ACLYP53396 1101 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 FOXP4Q8IVH2 680 aaPredicted RBP10.12□□□□□ -0.79
CD44-232ENST00000531118 ABRAQ8N0Z2 381 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 ZNF687Q8N1G0 1237 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 TMEM199Q8N511 208 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 ACER1Q8TDN7 264 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 TGFBRAP1Q8WUH2 860 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 XAGE2Q96GT9 111 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 PPP1R12CQ9BZL4 782 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 MTIF3Q9H2K0 278 aaKnown RBP10.12□□□□□ -0.79
CD44-232ENST00000531118 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 TANC1Q9C0D5 1861 aa10.12□□□□□ -0.79
CD44-232ENST00000531118 PTPRCP08575 1304 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 MOXD2PA6NHM9 499 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 MAP3K7O43318 606 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 TLL1O43897 1013 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 AKR1A1P14550 325 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 RAB3GAP1Q15042 981 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.11□□□□□ -0.79
CD44-232ENST00000531118 SPATA5Q8NB90 893 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 NUP133Q8WUM0 1156 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 TSEN34Q9BSV6 310 aaKnown RBP10.11□□□□□ -0.79
CD44-232ENST00000531118 ADAM33Q9BZ11 813 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 IL23AQ9NPF7 189 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 SAP30BPQ9UHR5 308 aaKnown RBP10.11□□□□□ -0.79
CD44-232ENST00000531118 COG5Q9UP83 839 aa10.11□□□□□ -0.79
CD44-232ENST00000531118 PTPRSQ13332 1948 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 MYADML2A6NDP7 307 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 ZNF865P0CJ78 1059 aaPredicted RBP10.1□□□□□ -0.79
CD44-232ENST00000531118 TAL1P17542 331 aaPredicted RBP10.1□□□□□ -0.79
CD44-232ENST00000531118 ARID4AP29374 1257 aaPredicted RBP10.1□□□□□ -0.79
CD44-232ENST00000531118 RABGGTBP53611 331 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 TIMM10P62072 90 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 NHLH1Q02575 133 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 POTEGQ6S5H5 508 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 ATF7IPQ6VMQ6 1270 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 ADGRA1Q86SQ6 560 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 NCAPG2Q86XI2 1143 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 MRPL50Q8N5N7 158 aaKnown RBP10.1□□□□□ -0.79
CD44-232ENST00000531118 TANGO6Q9C0B7 1094 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 MROH8Q9H579 483 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 MTCH2Q9Y6C9 303 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 SCN5AQ14524 2016 aa10.1□□□□□ -0.79
CD44-232ENST00000531118 A0A0U1RQG5 324 aaPredicted RBP10.09□□□□□ -0.79
CD44-232ENST00000531118 POTEMA6NI47 508 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 PI4K2BG5E9Z4 385 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 SMIM22K7EJ46 135 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 BAG3O95817 575 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 UBTFL1P0CB47 393 aaPredicted RBP10.09□□□□□ -0.79
CD44-232ENST00000531118 MYOGP15173 224 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 CST5P28325 142 aaPredicted RBP10.09□□□□□ -0.79
CD44-232ENST00000531118 MCAMP43121 646 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 CCSAPQ6IQ19 270 aaPredicted RBP10.09□□□□□ -0.79
CD44-232ENST00000531118 NAA16Q6N069 864 aaPredicted RBP10.09□□□□□ -0.79
CD44-232ENST00000531118 TATDN1Q6P1N9 297 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 FAM126BQ8IXS8 530 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 MB21D1Q8N884 522 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 KLHDC9Q8NEP7 349 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 TINF2Q9BSI4 451 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 COPRSQ9NQ92 184 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
CD44-232ENST00000531118 PCDHA11Q9Y5I1 949 aa10.09□□□□□ -0.79
CD44-232ENST00000531118 ELP1O95163 1332 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 EPOPA6NHQ4 379 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 TLR3O15455 904 aaKnown RBP10.08□□□□□ -0.8
CD44-232ENST00000531118 PGK2P07205 417 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 FCER1AP12319 257 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 POU3F3P20264 500 aaPredicted RBP10.08□□□□□ -0.8
CD44-232ENST00000531118 CYP2C18P33260 490 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 PPP4CP60510 307 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 TFCP2Q12800 502 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 PLS1Q14651 629 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 ABCB5Q2M3G0 1257 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 ATG4CQ96DT6 458 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 CDCA7LQ96GN5 454 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 GLT1D1Q96MS3 346 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 EHD4Q9H223 541 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 CD320Q9NPF0 282 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 LRP2BPQ9P2M1 347 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 AKAP2Q9Y2D5 859 aa10.08□□□□□ -0.8
CD44-232ENST00000531118 UMODL1Q5DID0 1318 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 POTEB3A0JP26 581 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 RFXAPO00287 272 aa10.07□□□□□ -0.8
CD44-232ENST00000531118 FGBP02675 491 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms