RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CYP2C8P10632 490 aa19.72■□□□□ 0.75
SF3B2-211ENST00000531041 GNAQP50148 359 aa19.72■□□□□ 0.75
SF3B2-211ENST00000531041 HERVK_113P62684 666 aa19.72■□□□□ 0.75
SF3B2-211ENST00000531041 RAB11FIP4Q86YS3 637 aa19.72■□□□□ 0.75
SF3B2-211ENST00000531041 CFHR5Q9BXR6 569 aa19.72■□□□□ 0.75
SF3B2-211ENST00000531041 RBM28Q9NW13 759 aaKnown RBP19.72■□□□□ 0.75
SF3B2-211ENST00000531041 LIMCH1Q9UPQ0 1083 aa19.72■□□□□ 0.75
SF3B2-211ENST00000531041 MGAMO43451 1857 aa19.71■□□□□ 0.75
SF3B2-211ENST00000531041 SPDYE16A6NNV3 312 aaPredicted RBP19.71■□□□□ 0.75
SF3B2-211ENST00000531041 GOLGA8AA7E2F4 631 aa19.71■□□□□ 0.75
SF3B2-211ENST00000531041 SLC16A2P36021 539 aa19.71■□□□□ 0.75
SF3B2-211ENST00000531041 METAP2P50579 478 aaKnown RBP eCLIP19.71■□□□□ 0.753e-8■■■□□ 18.8
SF3B2-211ENST00000531041 IKQ13123 557 aaPredicted RBP19.71■□□□□ 0.75
SF3B2-211ENST00000531041 RTN1Q16799 776 aa19.71■□□□□ 0.75
SF3B2-211ENST00000531041 CCDC144CPQ8IYA2 1237 aa19.71■□□□□ 0.75
SF3B2-211ENST00000531041 LZTS2Q9BRK4 669 aa19.71■□□□□ 0.75
SF3B2-211ENST00000531041 ZFYVE28Q9HCC9 887 aa19.71■□□□□ 0.75
SF3B2-211ENST00000531041 FAM217BQ9NTX9 383 aaPredicted RBP19.71■□□□□ 0.75
SF3B2-211ENST00000531041 CCDC196A0A1B0GTZ2 297 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 FDX1P10109 184 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 SMARCA1P28370 1054 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 GCLCP48506 637 aaPredicted RBP19.7■□□□□ 0.74
SF3B2-211ENST00000531041 MCM2P49736 904 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 CRHR2Q13324 411 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 SYDE2Q5VT97 1194 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 JMYQ8N9B5 988 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 SMCR8Q8TEV9 937 aaPredicted RBP19.7■□□□□ 0.74
SF3B2-211ENST00000531041 GTF3C2Q8WUA4 911 aaPredicted RBP19.7■□□□□ 0.74
SF3B2-211ENST00000531041 KIFC2Q96AC6 838 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 UBA5Q9GZZ9 404 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 RNF186Q9NXI6 227 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 SAGE1Q9NXZ1 904 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 PRR12Q9ULL5 1215 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 PCNTO95613 3336 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 ADGRA2Q96PE1 1338 aa19.7■□□□□ 0.74
SF3B2-211ENST00000531041 TLR2O60603 784 aa19.69■□□□□ 0.74
SF3B2-211ENST00000531041 CDC27P30260 824 aa19.69■□□□□ 0.74
SF3B2-211ENST00000531041 NOL8Q76FK4 1167 aaKnown RBP19.69■□□□□ 0.74
SF3B2-211ENST00000531041 MB21D1Q8N884 522 aa19.69■□□□□ 0.74
SF3B2-211ENST00000531041 ATG4CQ96DT6 458 aa19.69■□□□□ 0.74
SF3B2-211ENST00000531041 VWA5AO00534 786 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 PFKFB2O60825 505 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 TRPA1O75762 1119 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 CD2BP2O95400 341 aaKnown RBP19.68■□□□□ 0.74
SF3B2-211ENST00000531041 ADD1P35611 737 aaKnown RBP19.68■□□□□ 0.74
SF3B2-211ENST00000531041 CCT2P78371 535 aaKnown RBP19.68■□□□□ 0.74
SF3B2-211ENST00000531041 ME3Q16798 604 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 POTEEQ6S8J3 1075 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
SF3B2-211ENST00000531041 TMTC3Q6ZXV5 915 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 ADGRF4Q8IZF3 695 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 ZSCAN31Q96LW9 406 aaPredicted RBP19.68■□□□□ 0.74
SF3B2-211ENST00000531041 SPZ1Q9BXG8 430 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 SLKQ9H2G2 1235 aaPredicted RBP19.68■□□□□ 0.74
SF3B2-211ENST00000531041 CPVLQ9H3G5 476 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 RIOX1Q9H6W3 641 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 WBP1LQ9NX94 342 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 CYTH3O43739 400 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 PLEKHA8P1O95397 391 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 STK3Q13188 491 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 SLC35G1Q2M3R5 365 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 NBPF11Q86T75 865 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 SRBD1Q8N5C6 995 aaKnown RBP19.68■□□□□ 0.74
SF3B2-211ENST00000531041 BEGAINQ9BUH8 593 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 SLC38A10Q9HBR0 1119 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 NCOA5Q9HCD5 579 aaKnown RBP19.68■□□□□ 0.74
SF3B2-211ENST00000531041 RBPJLQ9UBG7 517 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 RABGAP1Q9Y3P9 1069 aa19.68■□□□□ 0.74
SF3B2-211ENST00000531041 ZNFX1Q9P2E3 1918 aaKnown RBP19.67■□□□□ 0.74
SF3B2-211ENST00000531041 LARGE1O95461 756 aa19.67■□□□□ 0.74
SF3B2-211ENST00000531041 C17orf99Q6UX52 265 aa19.67■□□□□ 0.74
SF3B2-211ENST00000531041 REPS2Q8NFH8 660 aa19.67■□□□□ 0.74
SF3B2-211ENST00000531041 MTMR8Q96EF0 704 aa19.67■□□□□ 0.74
SF3B2-211ENST00000531041 RANBP17Q9H2T7 1088 aaKnown RBP19.67■□□□□ 0.74
SF3B2-211ENST00000531041 JMJD4Q9H9V9 463 aa19.67■□□□□ 0.74
SF3B2-211ENST00000531041 SH2B1Q9NRF2 756 aaPredicted RBP19.67■□□□□ 0.74
SF3B2-211ENST00000531041 MORF4L1Q9UBU8 362 aa19.67■□□□□ 0.74
SF3B2-211ENST00000531041 ATP2A1O14983 1001 aa19.66■□□□□ 0.74
SF3B2-211ENST00000531041 ZBED4O75132 1171 aa19.66■□□□□ 0.74
SF3B2-211ENST00000531041 BCRP11274 1271 aa19.66■□□□□ 0.74
SF3B2-211ENST00000531041 FUT2Q10981 343 aa19.66■□□□□ 0.74
SF3B2-211ENST00000531041 SCRN1Q12765 414 aa19.66■□□□□ 0.74
SF3B2-211ENST00000531041 NTRK3Q16288 839 aa19.66■□□□□ 0.74
SF3B2-211ENST00000531041 CMTR1Q8N1G2 835 aaKnown RBP19.66■□□□□ 0.74
SF3B2-211ENST00000531041 R3HDMLQ9H3Y0 253 aa19.66■□□□□ 0.74
SF3B2-211ENST00000531041 BTBD7Q9P203 1132 aa19.66■□□□□ 0.74
SF3B2-211ENST00000531041 DOCK3Q8IZD9 2030 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 DHX16O60231 1041 aaKnown RBP19.65■□□□□ 0.74
SF3B2-211ENST00000531041 CNMDO75829 334 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 TBC1D8O95759 1140 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 OAZ1P54368 228 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 TMEM132BQ14DG7 1078 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 FAM110CQ1W6H9 321 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 ANKRD13CQ8N6S4 541 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 GTF3C6Q969F1 213 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 SNX21Q969T3 373 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 PAGR1Q9BTK6 254 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 VAT1LQ9HCJ6 419 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 TXNRD2Q9NNW7 524 aa19.65■□□□□ 0.74
SF3B2-211ENST00000531041 ZNF214Q9UL59 606 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms