RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 STAG2Q8N3U4 1231 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 NSUN7Q8NE18 718 aaKnown RBP11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 PHKBQ93100 1093 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 DDX11Q96FC9 970 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 CLMNQ96JQ2 1002 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 FEZ1Q99689 392 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 RBM28Q9NW13 759 aaKnown RBP11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 MAD2L2Q9UI95 211 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 ISY1Q9ULR0 285 aaKnown RBP11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 CSADQ9Y600 493 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 SNCAIPQ9Y6H5 919 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 CCDC196A0A1B0GTZ2 297 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 F5H6K3 240 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 UBE2Q2LH0YL09 131 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 CELF2O95319 508 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 NDUFB10O96000 172 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 PARP1P09874 1014 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 KIF5BP33176 963 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 KLRC3Q07444 240 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 NTRK3Q16288 839 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 CPLX2Q6PUV4 134 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 KCTD1Q719H9 257 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 ANKRD13AQ8IZ07 590 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 SPICE1Q8N0Z3 855 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 GMCL1P1Q8NEA9 526 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 MAP3K14Q99558 947 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 LLPHQ9BRT6 129 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 SH2D4AQ9H788 454 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 ELP3Q9H9T3 547 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 GOPCQ9HD26 462 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 GPCPD1Q9NPB8 672 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 TMX2Q9Y320 296 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 ZHX2Q9Y6X8 837 aa11.61□□□□□ -0.55
RPUSD4-205ENST00000530903 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 TRIM75PA6NK02 468 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 CDKL5O76039 1030 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 YY1P25490 414 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 DGKZQ13574 1117 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 MTMR2Q13614 643 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 PPP2R5BQ15173 497 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 MAP3K11Q16584 847 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 KIAA1755Q5JYT7 1200 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 TMTC3Q6ZXV5 915 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 SRBD1Q8N5C6 995 aaKnown RBP11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 SMARCC2Q8TAQ2 1214 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 SLC26A6Q9BXS9 759 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 CPVLQ9H3G5 476 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 AS3MTQ9HBK9 375 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 GBA2Q9HCG7 927 aaPredicted RBP11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 BAZ2BQ9UIF8 2168 aaKnown RBP11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 PTPRFP10586 1907 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 USP17L10C9JJH3 530 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 KLRF2D3W0D1 207 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 IFNAR1P17181 557 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 SLC1A4P43007 532 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 FOSBP53539 338 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 SPP2Q13103 211 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 ASPRV1Q53RT3 343 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 TTBK2Q6IQ55 1244 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 NBPF11Q86T75 865 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 C2orf69Q8N8R5 385 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 ZNF280CQ8ND82 737 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 DCAF4Q8WV16 495 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 PIBF1Q8WXW3 757 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 WDR18Q9BV38 432 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 CWC22Q9HCG8 908 aaKnown RBP11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 SYNPO2Q9UMS6 1093 aa11.6□□□□□ -0.55
RPUSD4-205ENST00000530903 CNTNAP5Q8WYK1 1306 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 hCG_1642624A0A1W2PR95 340 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 BMP3P12645 472 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 FDPSP14324 419 aaKnown RBP11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 DDIT3P35638 169 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 GNAQP50148 359 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 HMGN5P82970 282 aaKnown RBP11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 FUT2Q10981 343 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 SLC35G1Q2M3R5 365 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 LDLRAD1Q5T700 205 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 FAM184AQ8NB25 1140 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 UBA5Q9GZZ9 404 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 KIAA1683Q9H0B3 1180 aa11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 ORC3Q9UBD5 711 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-205ENST00000530903 SPDYE5A6NIY4 337 aa11.58□□□□□ -0.56
RPUSD4-205ENST00000530903 SLC16A2P36021 539 aa11.58□□□□□ -0.56
RPUSD4-205ENST00000530903 HMGCS2P54868 508 aa11.58□□□□□ -0.56
RPUSD4-205ENST00000530903 BACE1P56817 501 aa11.58□□□□□ -0.56
RPUSD4-205ENST00000530903 FKBP1BP68106 108 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms