RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 TRPC6Q9Y210 931 aa9.37□□□□□ -0.91
CTNND1-225ENST00000530094 EXOC3O60645 756 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 CCDC25Q86WR0 208 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 NOC2LQ9Y3T9 749 aaKnown RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 CERKLQ49MI3 558 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 SPOUT1Q5T280 376 aaKnown RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 MIER3Q7Z3K6 550 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 TTLL11Q8NHH1 800 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 DEPTORQ8TB45 409 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 CLSTN2Q9H4D0 955 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 ZKSCAN5Q9Y2L8 839 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 CARMIL3Q8ND23 1372 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 SEMA3EO15041 775 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 CIAO1O76071 339 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 NLRP12P59046 1061 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 NFIXQ14938 502 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 DCUN1D2Q6PH85 259 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 BARGINQ6ZT62 677 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 TMTC1Q8IUR5 882 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 LZTFL1Q9NQ48 299 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 SGSM2O43147 1006 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 EZH2Q15910 746 aaKnown RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 HERC4Q5GLZ8 1057 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 ARHGEF16Q5VV41 709 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 UBLCP1Q8WVY7 318 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 MRPL44Q9H9J2 332 aaKnown RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 PARP2Q9UGN5 583 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 FEZ2Q9UHY8 353 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 TECPR2O15040 1411 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 ABCD1P33897 745 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 BIRC2Q13490 618 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 CSRNP1Q96S65 589 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 DBNLQ9UJU6 430 aaKnown RBP9.36□□□□□ -0.91
CTNND1-225ENST00000530094 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
CTNND1-225ENST00000530094 GAS7O60861 476 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 CHRNA5P30532 468 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 GABPAQ06546 454 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 MCM6Q14566 821 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 FAM160B1Q5W0V3 765 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 INTS8Q75QN2 995 aaKnown RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 PDZD4Q76G19 769 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 IFT20Q8IY31 132 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 EXOC8Q8IYI6 725 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 NCOA5Q9HCD5 579 aaKnown RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 ABT1Q9ULW3 272 aaKnown RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 USP17L3A6NCW0 530 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 USP17L4A6NCW7 530 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 POLR2MP0CAP2 368 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 KARSQ15046 597 aaKnown RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 GEN1Q17RS7 908 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 USP17L1Q7RTZ2 530 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 FAM76AQ8TAV0 307 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 SECISBP2LQ93073 1101 aaKnown RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 MLXIPQ9HAP2 919 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.35□□□□□ -0.915e-6■■■□□ 17.3
CTNND1-225ENST00000530094 SNX14Q9Y5W7 946 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 A0A1B0GVL5 298 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 GCNT3O95395 438 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 CFBP00751 764 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 PI16Q6UXB8 463 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 PPP1R21Q6ZMI0 780 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 IFNL3Q8IZI9 196 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 PLCB1Q9NQ66 1216 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 SPATA31D1Q6ZQQ2 1576 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 hCG_1642624A0A1W2PR95 340 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 EBAG9O00559 213 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 TNNC2P02585 160 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 CCNA1P78396 465 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 LRRC47Q8N1G4 583 aaKnown RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 UIMC1Q96RL1 719 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 ADPGKQ9BRR6 497 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 TM6SF1Q9BZW5 370 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 ZNF277Q9NRM2 450 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-225ENST00000530094 ATP10DQ9P241 1426 aa9.35□□□□□ -0.91
CTNND1-225ENST00000530094 DDAH1O94760 285 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 YARSP54577 528 aaKnown RBP9.34□□□□□ -0.91
CTNND1-225ENST00000530094 SARNPP82979 210 aaKnown RBP9.34□□□□□ -0.91
CTNND1-225ENST00000530094 MTMR3Q13615 1198 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTNND1-225ENST00000530094 BSDC1Q9NW68 430 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-225ENST00000530094 CTTNBP2NLQ9P2B4 639 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 PFDN6O15212 129 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 SFMBT2Q5VUG0 894 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 C8orf74Q6P047 294 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 GLG1Q92896 1179 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 CCDC51Q96ER9 411 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 A0A0D9SFI3 127 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 A0A0G2JLW4 131 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 AOC3Q16853 763 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 PPFIBP2Q8ND30 876 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 NRBP2Q9NSY0 501 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 RNF123Q5XPI4 1314 aa9.34□□□□□ -0.91
CTNND1-225ENST00000530094 DYNLL1P63167 89 aaKnown RBP9.34□□□□□ -0.91
CTNND1-225ENST00000530094 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms