RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 NOL6Q9H6R4 1146 aaKnown RBP8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 F8W735 103 aaPredicted RBP8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 OPA1O60313 960 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 RAB6AP20340 208 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 KCNJ6P48051 423 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 GRB10Q13322 594 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 ZNF460Q14592 562 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 PKN3Q6P5Z2 889 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 FIBCD1Q8N539 461 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 SCLYQ96I15 445 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 CCDC140Q96MF4 163 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 PLVAPQ9BX97 442 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 PRDM14Q9GZV8 571 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 MTFR1LQ9H019 292 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 NKX2-4Q9H2Z4 354 aa8.67□□□□□ -1.02
CAPRIN1-208ENST00000530008 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 SNRPB2P08579 225 aaKnown RBP8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 ELNP15502 786 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 HOXC12P31275 282 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 IGFALSP35858 605 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 EPHB1P54762 984 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 TRIM28Q13263 835 aaKnown RBP8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 TTF1Q15361 905 aaPredicted RBP8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 DHCR24Q15392 516 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 TMEM130Q8N3G9 435 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 TMEM145Q8NBT3 493 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 WHAMMQ8TF30 809 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 DAGLAQ9Y4D2 1042 aa8.66□□□□□ -1.02
CAPRIN1-208ENST00000530008 CCDC194A0A1B0GVG4 234 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 KPNA6O60684 536 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 KATNA1O75449 491 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 SCG5P05408 212 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 PREPP48147 710 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 USP11P51784 963 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 LINC00114Q6XXX2 140 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 MAMDC2Q7Z304 686 aaPredicted RBP8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 NECAB2Q7Z6G3 386 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 NEDD1Q8NHV4 660 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 WDR66Q8TBY9 1149 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 C1orf159Q96HA4 380 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 CCDC136Q96JN2 1154 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 PSMG3-AS1Q96PY0 264 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 GFOD1Q9NXC2 390 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 GABBR1Q9UBS5 961 aa8.65□□□□□ -1.02
CAPRIN1-208ENST00000530008 PHLDB1Q86UU1 1377 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 MAP4K4O95819 1239 aaPredicted RBP8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 CPP00450 1065 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 JMJD7P0C870 316 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 FLT3P36888 993 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 SNW1Q13573 536 aaKnown RBP8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 SEPT7Q16181 437 aaKnown RBP8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 SLC35F1Q5T1Q4 408 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 CDPF1Q6NVV7 123 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 LHFPL2Q6ZUX7 228 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 C8orf48Q96LL4 319 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 MAGEB10Q96LZ2 347 aaPredicted RBP8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 ZDHHC15Q96MV8 337 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 ASPSCR1Q9BZE9 553 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 SEMA6CQ9H3T2 930 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 LGR6Q9HBX8 967 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 CYP26B1Q9NR63 512 aa8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 GEMIN8Q9NWZ8 242 aaKnown RBP8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 GPR55Q9Y2T6 319 aaPredicted RBP8.64□□□□□ -1.03
CAPRIN1-208ENST00000530008 TCRBV16S1A1N1A0A5B0 115 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 GPR39O43194 453 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 SART1O43290 800 aaKnown RBP8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 GAS2O43903 313 aaKnown RBP8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 LRRN2O75325 713 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 ALX3O95076 343 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 RASGRP1O95267 797 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 ECI1P42126 302 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 TBX4P57082 545 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 AMPD2Q01433 879 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 STAT4Q14765 748 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 NFE2Q16621 373 aaPredicted RBP8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 PRSS53Q2L4Q9 553 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 RNF219Q5W0B1 726 aaPredicted RBP8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 TSR2Q969E8 191 aaKnown RBP8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 SLC5A4Q9NY91 659 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 SF3B6Q9Y3B4 125 aaKnown RBP8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 TRAF6Q9Y4K3 522 aa8.63□□□□□ -1.03
CAPRIN1-208ENST00000530008 BRINP1O60477 761 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 VAMP4O75379 141 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 NFICP08651 508 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 SNRPNP63162 240 aaKnown RBP8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 CFAP100Q494V2 611 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 CDCA2Q69YH5 1023 aaPredicted RBP8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 GPAT2Q6NUI2 795 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 SHISA2Q6UWI4 295 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 USP53Q70EK8 1073 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 UBE2R2Q712K3 238 aaPredicted RBP8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 DSCC1Q9BVC3 393 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 YIPF2Q9BWQ6 316 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 ENAMQ9NRM1 1142 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 ASXL2Q76L83 1435 aa8.62□□□□□ -1.03
CAPRIN1-208ENST00000530008 B4E1Z4 1266 aa8.61□□□□□ -1.03
CAPRIN1-208ENST00000530008 GNB5O14775 395 aa8.61□□□□□ -1.03
CAPRIN1-208ENST00000530008 PRC1O43663 620 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms