RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 DDX41Q9UJV9 622 aaKnown RBP8.96□□□□□ -0.97
CTNND1-220ENST00000529526 FAM184BQ9ULE4 1060 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 TRPC6Q9Y210 931 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 MYOM2P54296 1465 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 RPN1P04843 607 aaKnown RBP8.96□□□□□ -0.98
CTNND1-220ENST00000529526 POLR2FP61218 127 aaKnown RBP8.96□□□□□ -0.98
CTNND1-220ENST00000529526 XKR9Q5GH70 373 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 RUFY4Q6ZNE9 571 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 SEPT14Q6ZU15 432 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 NEK8Q86SG6 692 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 PPP2R2CQ9Y2T4 447 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 SSH2Q76I76 1423 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 ADGRL2O95490 1459 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 ZWINTO95229 277 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 LTKP29376 864 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 SCYL2Q6P3W7 929 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 CAPN12Q6ZSI9 719 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 MED10Q9BTT4 135 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 CARD10Q9BWT7 1032 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 DISP1Q96F81 1524 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 BUB1BO60566 1050 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-220ENST00000529526 POLR2MP0CAP2 368 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 PDE6BP35913 854 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 USPL1Q5W0Q7 1092 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 VSIG1Q86XK7 387 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 SMCR8Q8TEV9 937 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-220ENST00000529526 UBE2Q2Q8WVN8 375 aa8.96□□□□□ -0.98
CTNND1-220ENST00000529526 M0QZ92 97 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 STAT1P42224 750 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 LIG4P49917 911 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 YARSP54577 528 aaKnown RBP8.95□□□□□ -0.98
CTNND1-220ENST00000529526 UBXN2AP68543 259 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 POLA2Q14181 598 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 KRT71Q3SY84 523 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 CHURC1Q8WUH1 139 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 MCUR1Q96AQ8 359 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 PLEKHG3A1L390 1219 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 DLATP10515 647 aaKnown RBP8.95□□□□□ -0.98
CTNND1-220ENST00000529526 VPS41P49754 854 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 TBC1D10BQ4KMP7 808 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-220ENST00000529526 SDCCAG8Q86SQ7 713 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-220ENST00000529526 RNF169Q8NCN4 708 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 RSAD2Q8WXG1 361 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 EPSTI1Q96J88 318 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 PLEKHF1Q96S99 279 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 I3L4J1 428 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 KRIT1O00522 736 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 PCCAP05165 728 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-220ENST00000529526 PCK1P35558 622 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 PTGDRQ13258 359 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 GADL1Q6ZQY3 521 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 OR8K1Q8NGG5 319 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 HOOK2Q96ED9 719 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 DPH5Q9H2P9 285 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 BCL2L12Q9HB09 334 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 BCS1LQ9Y276 419 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 CMA1P23946 247 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 CYP4A11Q02928 519 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 KRT81Q14533 505 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 CCDC62Q6P9F0 684 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 ZNF589Q86UQ0 364 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-220ENST00000529526 FBXO11Q86XK2 927 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 MMS19Q96T76 1030 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
CTNND1-220ENST00000529526 PLCB1Q9NQ66 1216 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 ADGBQ8N7X0 1667 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 TMEM2Q9UHN6 1383 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 RGS12O14924 1447 aa8.95□□□□□ -0.98
CTNND1-220ENST00000529526 TMEM232C9JQI7 657 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 GBP1P32455 592 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 CTNNA1P35221 906 aaKnown RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 IFRD2Q12894 506 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 MTMR3Q13615 1198 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 SPOUT1Q5T280 376 aaKnown RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 CCDC125Q86Z20 511 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 RPUSD2Q8IZ73 545 aaKnown RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 RASGRP4Q8TDF6 673 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 PGBD1Q96JS3 809 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 MAP3K15Q6ZN16 1313 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 A0A087WWV3 80 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 DDAH1O94760 285 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 IFNB1P01574 187 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 DYNLL1P63167 89 aaKnown RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 ICA1Q05084 483 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 ERCC6LQ2NKX8 1250 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 SESTD1Q86VW0 696 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 LRRC8AQ8IWT6 810 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 SLFN12Q8IYM2 578 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 RASEFQ8IZ41 740 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 UHMK1Q8TAS1 419 aaKnown RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 RAB20Q9NX57 234 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 SEPT10Q9P0V9 454 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 STAM2O75886 525 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 ATP2B4P23634 1241 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 PNMA8AQ86V59 439 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 CTAGE3PQ8IX95 158 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 SMAP1Q8IYB5 467 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 CABS1Q96KC9 395 aa8.94□□□□□ -0.98
CTNND1-220ENST00000529526 MKRN1Q9UHC7 482 aaKnown RBP8.94□□□□□ -0.98
CTNND1-220ENST00000529526 DBNLQ9UJU6 430 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms