RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 INTS13Q9NVM9 706 aa10.11□□□□□ -0.79
CAPRIN1-206ENST00000528948 CWC25Q9NXE8 425 aaPredicted RBP10.11□□□□□ -0.79
CAPRIN1-206ENST00000528948 CORO1CQ9ULV4 474 aaPredicted RBP10.11□□□□□ -0.79
CAPRIN1-206ENST00000528948 FLT4P35916 1363 aa10.11□□□□□ -0.79
CAPRIN1-206ENST00000528948 PALLDQ8WX93 1383 aa10.11□□□□□ -0.79
CAPRIN1-206ENST00000528948 PLEKHG1Q9ULL1 1385 aa10.11□□□□□ -0.79
CAPRIN1-206ENST00000528948 A0A0D9SFI3 127 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 LRRC10BA6NIK2 292 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 AGPSO00116 658 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 BIN1O00499 593 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 CPLX1O14810 134 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 MGRN1O60291 552 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 DDX58O95786 925 aaKnown RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 NDUFV2P19404 249 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 PDIA3P30101 505 aaKnown RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 LSP1P33241 339 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 SARSP49591 514 aaKnown RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 MMP16P51512 607 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 ADKP55263 362 aaKnown RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 PAK2Q13177 524 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 SAFB2Q14151 953 aaKnown RBP eCLIP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 NAA25Q14CX7 972 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 POSTNQ15063 836 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 PTGISQ16647 500 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 RNF187Q5TA31 235 aaPredicted RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 C6orf89Q6UWU4 347 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 RAD9BQ6WBX8 426 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 CROCCP2Q86T23 111 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 IFT20Q8IY31 132 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 ANKS4BQ8N8V4 417 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 TRIM58Q8NG06 486 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 ZNF483Q8TF39 744 aaPredicted RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 ZNF473Q8WTR7 871 aaKnown RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 CLIC6Q96NY7 704 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 SPAG5Q96R06 1193 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 PHAXQ9H814 394 aaKnown RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 CNOT10Q9H9A5 744 aaKnown RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 EBF2Q9HAK2 575 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 GPBP1L1Q9HC44 474 aaPredicted RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 ADD3Q9UEY8 706 aaKnown RBP10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 KCNH3Q9ULD8 1083 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 COL15A1P39059 1388 aa10.1□□□□□ -0.79
CAPRIN1-206ENST00000528948 PTPRUQ92729 1446 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 AGLP35573 1532 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 A0A1W2PQC6 194 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 SOWAHDA6NJG2 315 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 TMEM232C9JQI7 657 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 C6orf229H3BNL8 230 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 BUB1BO60566 1050 aaPredicted RBP10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 CTDNEP1O95476 244 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 FESP07332 822 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 FERP16591 822 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 HOXA7P31268 230 aaPredicted RBP10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 PAFAH1B1P43034 410 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 KIF23Q02241 960 aaPredicted RBP10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 CCDC57Q2TAC2 916 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 TTC39AQ5SRH9 613 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 CFAP58Q5T655 872 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 MSL1Q68DK7 614 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 EP400NLQ6ZTU2 488 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 NLRP14Q86W24 1093 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 FUKQ8N0W3 1084 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 ZFAND2BQ8WV99 257 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 GSDMAQ96QA5 445 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 PRKD2Q9BZL6 878 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 SIL1Q9H173 461 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 C9orf78Q9NZ63 289 aaPredicted RBP10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 STK26Q9P289 416 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 CTNNAL1Q9UBT7 734 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 PCDHGC3Q9UN70 934 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 PCDHA5Q9Y5H7 936 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 CLIC4Q9Y696 253 aa10.09□□□□□ -0.79
CAPRIN1-206ENST00000528948 IGSF1Q8N6C5 1336 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 TECPR2O15040 1411 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 NFAT5O94916 1531 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 C5orf60A6NFR6 353 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 PDLIM1O00151 329 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 MYO1FO00160 1098 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 FLOT1O75955 427 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 CYP21A2P08686 494 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 PAEPP09466 180 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 NR1D1P20393 614 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 CASP14P31944 242 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 MDH1P40925 334 aaKnown RBP10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 CDK17Q00537 523 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 RBL2Q08999 1139 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 MTMR2Q13614 643 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 MTMR3Q13615 1198 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 SAFBQ15424 915 aaKnown RBP eCLIP10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 CMPK2Q5EBM0 449 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 SPDYCQ5MJ68 293 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 CDKAL1Q5VV42 579 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 NAIF1Q69YI7 327 aaPredicted RBP10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 CAPRIN2Q6IMN6 1127 aaKnown RBP10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 CCDC129Q6ZRS4 1044 aa10.08□□□□□ -0.8
CAPRIN1-206ENST00000528948 CEP57Q86XR8 500 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms