RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 RCSD1Q6JBY9 416 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 CENPQQ7L2Z9 268 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-216ENST00000528739 FAM160B2Q86V87 743 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 DDX11Q96FC9 970 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 GMCL1Q96IK5 515 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 HTATIP2Q9BUP3 242 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 FLRT1Q9NZU1 646 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 COBLO75128 1261 aa16.83■□□□□ 0.28
CAPN1-216ENST00000528739 PGK2P07205 417 aa16.83■□□□□ 0.28
CAPN1-216ENST00000528739 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
CAPN1-216ENST00000528739 CHMLP26374 656 aa16.83■□□□□ 0.28
CAPN1-216ENST00000528739 PRPF38BQ5VTL8 546 aaKnown RBP16.83■□□□□ 0.28
CAPN1-216ENST00000528739 IQCA1Q86XH1 822 aa16.83■□□□□ 0.28
CAPN1-216ENST00000528739 ABRAQ8N0Z2 381 aa16.83■□□□□ 0.28
CAPN1-216ENST00000528739 TMEM47Q9BQJ4 181 aa16.83■□□□□ 0.28
CAPN1-216ENST00000528739 HOMER2Q9NSB8 354 aa16.83■□□□□ 0.28
CAPN1-216ENST00000528739 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-216ENST00000528739 NEDD4P46934 1319 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 FRMPD2Q68DX3 1309 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-216ENST00000528739 B4E1Z4 1266 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 KDM4AO75164 1064 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 HOXC6P09630 235 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 SNAP25P60880 206 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 CCDC174Q6PII3 467 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 REPS2Q8NFH8 660 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 DCAF4Q8WV16 495 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 CCDC136Q96JN2 1154 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 NBPF3Q9H094 633 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 SLC38A10Q9HBR0 1119 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 TCP11L1Q9NUJ3 509 aa16.82■□□□□ 0.28
CAPN1-216ENST00000528739 KIAA0100Q14667 2235 aaKnown RBP16.82■□□□□ 0.28
CAPN1-216ENST00000528739 RAD50Q92878 1312 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-216ENST00000528739 CAPN2P17655 700 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 MAP3K21Q5TCX8 1036 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 NECAB2Q7Z6G3 386 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 ANKRD35Q8N283 1001 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 PAWRQ96IZ0 340 aaKnown RBP16.81■□□□□ 0.28
CAPN1-216ENST00000528739 KRT23Q9C075 422 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 CRISPLD2Q9H0B8 497 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 IL25Q9H293 177 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 RIPK3Q9Y572 518 aa16.81■□□□□ 0.28
CAPN1-216ENST00000528739 FDX1P10109 184 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 SLC16A2P36021 539 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 TRDNQ13061 729 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 CCDC178Q5BJE1 867 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 PRAMEF19Q5SWL8 479 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 OLFML2BQ68BL8 750 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 RASGRP2Q7LDG7 609 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 MAML3Q96JK9 1138 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 TTC14Q96N46 770 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
CAPN1-216ENST00000528739 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-216ENST00000528739 ALAS1P13196 640 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 ANO1Q5XXA6 986 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 SKAP1Q86WV1 359 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 DIS3LQ8TF46 1054 aaKnown RBP16.79■□□□□ 0.28
CAPN1-216ENST00000528739 AGBL1Q96MI9 1066 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 UBAC1Q9BSL1 405 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 FBXO40Q9UH90 709 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 PRR12Q9ULL5 1215 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-216ENST00000528739 PLXNB2O15031 1838 aa16.79■□□□□ 0.28
CAPN1-216ENST00000528739 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
CAPN1-216ENST00000528739 ATP2A1O14983 1001 aa16.78■□□□□ 0.28
CAPN1-216ENST00000528739 OAZ1P54368 228 aa16.78■□□□□ 0.28
CAPN1-216ENST00000528739 PTH1RQ03431 593 aa16.78■□□□□ 0.28
CAPN1-216ENST00000528739 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
CAPN1-216ENST00000528739 CHST13Q8NET6 341 aa16.78■□□□□ 0.28
CAPN1-216ENST00000528739 ZSCAN10Q96SZ4 725 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-216ENST00000528739 ZSWIM5Q9P217 1185 aa16.78■□□□□ 0.28
CAPN1-216ENST00000528739 DDX20Q9UHI6 824 aaKnown RBP16.78■□□□□ 0.28
CAPN1-216ENST00000528739 RBBP6Q7Z6E9 1792 aaKnown RBP16.78■□□□□ 0.28
CAPN1-216ENST00000528739 EVI5O60447 810 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 MSCO60682 206 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 NOVP48745 357 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 NT5C2P49902 561 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 SYDE2Q5VT97 1194 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 RALYLQ86SE5 291 aaKnown RBP16.77■□□□□ 0.28
CAPN1-216ENST00000528739 DGKHQ86XP1 1220 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 TRERF1Q96PN7 1200 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 C11orf49Q9H6J7 331 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 ACAD9Q9H845 621 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 RNF146Q9NTX7 359 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 OGDHLQ9ULD0 1010 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 CCPG1Q9ULG6 757 aa16.77■□□□□ 0.28
CAPN1-216ENST00000528739 RLFQ13129 1914 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 SGSM2O43147 1006 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 PLA2G6O60733 806 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 GOLGA8HP0CJ92 632 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 PDHBP11177 359 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 ZNF792Q3KQV3 632 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 TRPV1Q8NER1 839 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 TINF2Q9BSI4 451 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 CNPY2Q9Y2B0 182 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms