RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TSPY3P0CV98 308 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 TSPY8P0CW00 308 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 PCP11498 1178 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 MCCP23508 829 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 TFAP4Q01664 338 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 FAM110CQ1W6H9 321 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 ADCK5Q3MIX3 580 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 MAP3K21Q5TCX8 1036 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 USP17L2Q6R6M4 530 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 RALYLQ86SE5 291 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 PROCA1Q8NCQ7 364 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 CEP95Q96GE4 821 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 RPAP3Q9H6T3 665 aaPredicted RBP13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 FBXO28Q9NVF7 368 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 GJD2Q9UKL4 321 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 SNX14Q9Y5W7 946 aa13.6□□□□□ -0.23
CCDC90B-210ENST00000528149 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 ZKSCAN1P17029 563 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 TRDNQ13061 729 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 SHHQ15465 462 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 C9orf50Q5SZB4 431 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 CYB5R4Q7L1T6 521 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 MB21D2Q8IYB1 491 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 NCOA7Q8NI08 942 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 ESR2Q92731 530 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 KCNB2Q92953 911 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 ZKSCAN3Q9BRR0 538 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 PAGR1Q9BTK6 254 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 BACH2Q9BYV9 841 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 KRT23Q9C075 422 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 IL17RBQ9NRM6 502 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 TMOD4Q9NZQ9 345 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 COL11A1P12107 1806 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 FRMPD3Q5JV73 1810 aa13.59□□□□□ -0.23
CCDC90B-210ENST00000528149 RAD21O60216 631 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 HERVK_113P62684 666 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 Q3C1V9 767 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 CHST3Q7LGC8 479 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 NEDD1Q8NHV4 660 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 C12orf42Q96LP6 360 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 JAKMIP1Q96N16 626 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 PORCNQ9H237 461 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 GINM1Q9NU53 330 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 BTBD7Q9P203 1132 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 RBPJLQ9UBG7 517 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 TMX2Q9Y320 296 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 MYH6P13533 1939 aa13.58□□□□□ -0.24
CCDC90B-210ENST00000528149 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-210ENST00000528149 CPA1P15085 419 aa13.57□□□□□ -0.24
CCDC90B-210ENST00000528149 ANTXR2P58335 489 aa13.57□□□□□ -0.24
CCDC90B-210ENST00000528149 SMAD3P84022 425 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-210ENST00000528149 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
CCDC90B-210ENST00000528149 ZSWIM5Q9P217 1185 aa13.57□□□□□ -0.24
CCDC90B-210ENST00000528149 CLIP2Q9UDT6 1046 aa13.57□□□□□ -0.24
CCDC90B-210ENST00000528149 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
CCDC90B-210ENST00000528149 C19orf81C9J6K1 198 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 CYP2B6P20813 491 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 HOXA7P31268 230 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 IRX3P78415 501 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 KRT32Q14532 448 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 LHX8Q68G74 356 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 ATG4CQ96DT6 458 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 TCEANC2Q96MN5 208 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 NEK1Q96PY6 1258 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 LRRC2Q9BYS8 371 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 TANGO6Q9C0B7 1094 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 VCPKMTQ9H867 229 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 KANSL2Q9H9L4 492 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 TNKSO95271 1327 aa13.56□□□□□ -0.24
CCDC90B-210ENST00000528149 PRC1O43663 620 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 NDUFB10O96000 172 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 CASTP20810 708 aaKnown RBP13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 CCND3P30281 292 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 SNAP25P60880 206 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 CATSPERGQ6ZRH7 1159 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 ADAMTS19Q8TE59 1207 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 C22orf23Q9BZE7 217 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 ARHGEF10LQ9HCE6 1279 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 PNMA3Q9UL41 463 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 STX8Q9UNK0 236 aa13.55□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L15C9J2P7 530 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L13C9JLJ4 530 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L11C9JVI0 530 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L18D6R9N7 530 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L22D6RA61 530 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L17D6RBQ6 530 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L19D6RCP7 530 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L20D6RJB6 530 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms