RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-204ENST00000527906 JAG1P78504 1218 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 SEPT2Q15019 361 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 CHST3Q7LGC8 479 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 BRF1Q92994 677 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 CHMP4CQ96CF2 233 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
PSMC3-204ENST00000527906 ZSCAN31Q96LW9 406 aaPredicted RBP12.73□□□□□ -0.37
PSMC3-204ENST00000527906 TCEANC2Q96MN5 208 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 PARK7Q99497 189 aaKnown RBP12.73□□□□□ -0.37
PSMC3-204ENST00000527906 AS3MTQ9HBK9 375 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 SH2B1Q9NRF2 756 aaPredicted RBP12.73□□□□□ -0.37
PSMC3-204ENST00000527906 RAPGEFL1Q9UHV5 662 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 STX8Q9UNK0 236 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 LIMCH1Q9UPQ0 1083 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 EYSQ5T1H1 3165 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 PHIPQ8WWQ0 1821 aa12.73□□□□□ -0.37
PSMC3-204ENST00000527906 CCDC69A6NI79 296 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 NMT2O60551 498 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 CALM1P0DP23 149 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 CALM2P0DP24 149 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 CALM3P0DP25 149 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 PTPRAP18433 802 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
PSMC3-204ENST00000527906 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 APOA5Q6Q788 366 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 CATIPQ7Z7H3 387 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 ANKLE1Q8NAG6 615 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 TMEM47Q9BQJ4 181 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 KIAA1683Q9H0B3 1180 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 TMX2Q9Y320 296 aa12.72□□□□□ -0.37
PSMC3-204ENST00000527906 CYP2C8P10632 490 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 EEF2P13639 858 aaKnown RBP12.71□□□□□ -0.37
PSMC3-204ENST00000527906 TROAPQ12815 778 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 IRF5Q13568 498 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 MOGSQ13724 837 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
PSMC3-204ENST00000527906 SYNE3Q6ZMZ3 975 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 PNMA1Q8ND90 353 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.37
PSMC3-204ENST00000527906 LRRC2Q9BYS8 371 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.71□□□□□ -0.37
PSMC3-204ENST00000527906 KCNH4Q9UQ05 1017 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.37
PSMC3-204ENST00000527906 SLC12A7Q9Y666 1083 aa12.71□□□□□ -0.37
PSMC3-204ENST00000527906 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
PSMC3-204ENST00000527906 SNHG28P0DPA3 235 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 USP14P54578 494 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 BECN1Q14457 450 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 HSCBQ8IWL3 235 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 ZNF280CQ8ND82 737 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 LPAR1Q92633 364 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 SYMPKQ92797 1274 aaKnown RBP12.7□□□□□ -0.38
PSMC3-204ENST00000527906 GMCL1Q96IK5 515 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 C11orf49Q9H6J7 331 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 GOPCQ9HD26 462 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
PSMC3-204ENST00000527906 CLIP2Q9UDT6 1046 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 TPCN1Q9ULQ1 816 aa12.7□□□□□ -0.38
PSMC3-204ENST00000527906 PTPRFP10586 1907 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 CCDC196A0A1B0GTZ2 297 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 C19orf81C9J6K1 198 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 USP17L10C9JJH3 530 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 K7ELQ4 463 aaPredicted RBP12.69□□□□□ -0.38
PSMC3-204ENST00000527906 TNPO2O14787 897 aaKnown RBP12.69□□□□□ -0.38
PSMC3-204ENST00000527906 ZBTB43O43298 467 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 DHX16O60231 1041 aaKnown RBP12.69□□□□□ -0.38
PSMC3-204ENST00000527906 PFKFB2O60825 505 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 PDIA3P30101 505 aaKnown RBP12.69□□□□□ -0.38
PSMC3-204ENST00000527906 KIF5BP33176 963 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 PLA2G5P39877 138 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 BACE1P56817 501 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 APOBRQ0VD83 1088 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 ZNF697Q5TEC3 545 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 CLEC10AQ8IUN9 316 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 CDX2Q99626 313 aaPredicted RBP12.69□□□□□ -0.38
PSMC3-204ENST00000527906 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 AFG3L2Q9Y4W6 797 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 ZHX2Q9Y6X8 837 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 PRUNE2Q8WUY3 3088 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 LOC285556D6RIA3 1793 aa12.69□□□□□ -0.38
PSMC3-204ENST00000527906 CDH23Q9H251 3354 aa12.68□□□□□ -0.38
PSMC3-204ENST00000527906 A0A1W2PRG0 241 aa12.68□□□□□ -0.38
PSMC3-204ENST00000527906 CXCL11O14625 94 aa12.68□□□□□ -0.38
PSMC3-204ENST00000527906 ASPRV1Q53RT3 343 aa12.68□□□□□ -0.38
PSMC3-204ENST00000527906 SH3D19Q5HYK7 790 aa12.68□□□□□ -0.38
PSMC3-204ENST00000527906 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
PSMC3-204ENST00000527906 GPAT2Q6NUI2 795 aa12.68□□□□□ -0.38
PSMC3-204ENST00000527906 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
PSMC3-204ENST00000527906 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms