RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 USP17L21D6R901 530 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 HOXC6P09630 235 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 TAL1P17542 331 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-210ENST00000527699 ADD2P35612 726 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 TMEM132BQ14DG7 1078 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 RAB30Q15771 203 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 FAM47AQ5JRC9 791 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 TMEM179Q6ZVK1 233 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-210ENST00000527699 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 CD320Q9NPF0 282 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 COG5Q9UP83 839 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 SLC4A4Q9Y6R1 1079 aa11.93□□□□□ -0.5
CAPN1-210ENST00000527699 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-210ENST00000527699 GFRA3O60609 400 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 MSCO60682 206 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 PGK1P00558 417 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 CLTBP09497 229 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 EEF2P13639 858 aaKnown RBP11.92□□□□□ -0.5
CAPN1-210ENST00000527699 ALADP13716 330 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 TLE2Q04725 743 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 FAM83BQ5T0W9 1011 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 ARRDC4Q8NCT1 418 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 MMP19Q99542 508 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPN1-210ENST00000527699 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
CAPN1-210ENST00000527699 IGSF3O75054 1194 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 LRRC41Q15345 812 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 C12orf60Q5U649 245 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 TSHZ3Q63HK5 1081 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 OLFML2BQ68BL8 750 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 MAML3Q96JK9 1138 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 PUS7LQ9H0K6 701 aaKnown RBP11.91□□□□□ -0.5
CAPN1-210ENST00000527699 SWAP70Q9UH65 585 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
CAPN1-210ENST00000527699 PTPRZ1P23471 2315 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-210ENST00000527699 SEPT4O43236 478 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 STRNO43815 780 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 HMMRO75330 724 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 FCER1AP12319 257 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 IRX5P78411 483 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-210ENST00000527699 C20orf194Q5TEA3 1177 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 RPAP2Q8IXW5 612 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-210ENST00000527699 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.9□□□□□ -0.5
CAPN1-210ENST00000527699 GBF1Q92538 1859 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 HLA-CQ95604 372 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 MROH8Q9H579 483 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 TMEM39AQ9NV64 488 aa11.9□□□□□ -0.5
CAPN1-210ENST00000527699 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.51
CAPN1-210ENST00000527699 CHD9Q3L8U1 2897 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 BAHCC1Q9P281 2608 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
CAPN1-210ENST00000527699 PQBP1O60828 265 aaKnown RBP11.89□□□□□ -0.51
CAPN1-210ENST00000527699 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 IGHA2P01877 340 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 ATP5JP18859 108 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 CCDC174Q6PII3 467 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 ERMP1Q7Z2K6 904 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 AMOTL1Q8IY63 956 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 GJD3Q8N144 294 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 ANKS1AQ92625 1134 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 YTHDC1Q96MU7 727 aaKnown RBP11.89□□□□□ -0.51
CAPN1-210ENST00000527699 HAUS7Q99871 368 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.89□□□□□ -0.51
CAPN1-210ENST00000527699 XPNPEP3Q9NQH7 507 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 ATP8A2Q9NTI2 1148 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 ZBTB40Q9NUA8 1239 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 SLC5A4Q9NY91 659 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 ZNF318Q5VUA4 2279 aa11.89□□□□□ -0.51
CAPN1-210ENST00000527699 VWA5AO00534 786 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 STAT3P40763 770 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 KCTD2Q14681 263 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 SNX17Q15036 470 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 PPP2R2DQ66LE6 453 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 CPXCR1Q8N123 301 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 MB21D1Q8N884 522 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 DDRGK1Q96HY6 314 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 SH2D4AQ9H788 454 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 ISY1Q9ULR0 285 aaKnown RBP11.88□□□□□ -0.51
CAPN1-210ENST00000527699 DDX19BQ9UMR2 479 aa11.88□□□□□ -0.51
CAPN1-210ENST00000527699 PKD1L2Q7Z442 2459 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 ZFHX2Q9C0A1 2572 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-210ENST00000527699 A0A0G2JMZ2 1700 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 KIAA0355O15063 1070 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 PRDM1O75626 825 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 SLC25A27O95847 323 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 RARBP10826 455 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 ZNF792Q3KQV3 632 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 SNRNP48Q6IEG0 339 aaKnown RBP11.87□□□□□ -0.51
CAPN1-210ENST00000527699 RIOX2Q8IUF8 465 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 CCDC17Q96LX7 622 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms