RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 SYNGAP1Q96PV0 1343 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 DNAJC25-GNG10A0A024R161 153 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 IGKV6D-41A0A0C4DH26 115 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 F5H6K3 240 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 ATP2A1O14983 1001 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 NDUFB10O96000 172 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 CLTBP09497 229 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 KLRC3Q07444 240 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 SNRNP48Q6IEG0 339 aaKnown RBP22.43■■□□□ 1.18
CAPN1-206ENST00000526966 MAMDC4Q6UXC1 1216 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.43■■□□□ 1.18
CAPN1-206ENST00000526966 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.43■■□□□ 1.18
CAPN1-206ENST00000526966 APPBP2Q92624 585 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 LENG1Q96BZ8 264 aaPredicted RBP22.43■■□□□ 1.18
CAPN1-206ENST00000526966 EPB41L4AQ9HCS5 686 aaPredicted RBP22.43■■□□□ 1.18
CAPN1-206ENST00000526966 CNPY2Q9Y2B0 182 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 RIPK3Q9Y572 518 aa22.43■■□□□ 1.18
CAPN1-206ENST00000526966 VCANP13611 3396 aa22.42■■□□□ 1.18
CAPN1-206ENST00000526966 KIAA0355O15063 1070 aa22.42■■□□□ 1.18
CAPN1-206ENST00000526966 C20orf194Q5TEA3 1177 aa22.42■■□□□ 1.18
CAPN1-206ENST00000526966 PRPF38AQ8NAV1 312 aaKnown RBP22.42■■□□□ 1.18
CAPN1-206ENST00000526966 TSEN34Q9BSV6 310 aaKnown RBP22.42■■□□□ 1.18
CAPN1-206ENST00000526966 MKNK2Q9HBH9 465 aa22.42■■□□□ 1.18
CAPN1-206ENST00000526966 SYNRGQ9UMZ2 1314 aa22.41■■□□□ 1.18
CAPN1-206ENST00000526966 SNAI1O95863 264 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-206ENST00000526966 ZNF467Q7Z7K2 595 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-206ENST00000526966 CDX2Q99626 313 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-206ENST00000526966 SEMA6BQ9H3T3 888 aa22.41■■□□□ 1.18
CAPN1-206ENST00000526966 SYNPO2Q9UMS6 1093 aa22.41■■□□□ 1.18
CAPN1-206ENST00000526966 MINDY4BA8MYZ0 360 aa22.4■■□□□ 1.18
CAPN1-206ENST00000526966 GPAA1O43292 621 aa22.4■■□□□ 1.18
CAPN1-206ENST00000526966 CCSAPQ6IQ19 270 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-206ENST00000526966 ANKRD33Q7Z3H0 272 aa22.4■■□□□ 1.18
CAPN1-206ENST00000526966 STK11IPQ8N1F8 1099 aa22.4■■□□□ 1.18
CAPN1-206ENST00000526966 KLHDC9Q8NEP7 349 aa22.4■■□□□ 1.18
CAPN1-206ENST00000526966 MKL1Q969V6 931 aa22.4■■□□□ 1.18
CAPN1-206ENST00000526966 TOX2Q96NM4 488 aa22.4■■□□□ 1.18
CAPN1-206ENST00000526966 COL25A1Q9BXS0 654 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-206ENST00000526966 TTYH1Q9H313 450 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-206ENST00000526966 PLIN4Q96Q06 1357 aa22.39■■□□□ 1.18
CAPN1-206ENST00000526966 RNF113AO15541 343 aaKnown RBP22.39■■□□□ 1.17
CAPN1-206ENST00000526966 PQBP1O60828 265 aaKnown RBP22.39■■□□□ 1.17
CAPN1-206ENST00000526966 ZFYP08048 801 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-206ENST00000526966 GNAT2P19087 354 aa22.39■■□□□ 1.17
CAPN1-206ENST00000526966 ACLYP53396 1101 aa22.39■■□□□ 1.17
CAPN1-206ENST00000526966 EPHB4P54760 987 aa22.39■■□□□ 1.17
CAPN1-206ENST00000526966 DDX11Q96FC9 970 aa22.39■■□□□ 1.17
CAPN1-206ENST00000526966 SLC38A10Q9HBR0 1119 aa22.39■■□□□ 1.17
CAPN1-206ENST00000526966 CLIP2Q9UDT6 1046 aa22.39■■□□□ 1.17
CAPN1-206ENST00000526966 FAM184BQ9ULE4 1060 aa22.39■■□□□ 1.17
CAPN1-206ENST00000526966 MOXD2PA6NHM9 499 aa22.38■■□□□ 1.17
CAPN1-206ENST00000526966 RAG1P15918 1043 aa22.38■■□□□ 1.17
CAPN1-206ENST00000526966 GPATCH3Q96I76 525 aa22.38■■□□□ 1.17
CAPN1-206ENST00000526966 FGD4Q96M96 766 aa22.38■■□□□ 1.17
CAPN1-206ENST00000526966 DCTPP1Q9H773 170 aa22.38■■□□□ 1.17
CAPN1-206ENST00000526966 STARD7Q9NQZ5 370 aa22.38■■□□□ 1.17
CAPN1-206ENST00000526966 MTMR4Q9NYA4 1195 aa22.38■■□□□ 1.17
CAPN1-206ENST00000526966 TMEM265A0A087WTH1 108 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 ZBED4O75132 1171 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 DUSP11O75319 330 aaKnown RBP22.37■■□□□ 1.17
CAPN1-206ENST00000526966 CST5P28325 142 aaPredicted RBP22.37■■□□□ 1.17
CAPN1-206ENST00000526966 TDO2P48775 406 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 FAAP100Q0VG06 881 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 TSHZ3Q63HK5 1081 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 GMCL1P1Q8NEA9 526 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 NUP133Q8WUM0 1156 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 CEP95Q96GE4 821 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 RNPC3Q96LT9 517 aaKnown RBP22.37■■□□□ 1.17
CAPN1-206ENST00000526966 ZNF287Q9HBT7 754 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 FEM1BQ9UK73 627 aa22.37■■□□□ 1.17
CAPN1-206ENST00000526966 ZHX1Q9UKY1 873 aaPredicted RBP22.37■■□□□ 1.17
CAPN1-206ENST00000526966 M0R2C6 588 aa22.36■■□□□ 1.17
CAPN1-206ENST00000526966 PRDM1O75626 825 aa22.36■■□□□ 1.17
CAPN1-206ENST00000526966 OAZ1P54368 228 aa22.36■■□□□ 1.17
CAPN1-206ENST00000526966 FPGSQ05932 587 aa22.36■■□□□ 1.17
CAPN1-206ENST00000526966 ZNF444Q8N0Y2 327 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-206ENST00000526966 KIFC2Q96AC6 838 aa22.36■■□□□ 1.17
CAPN1-206ENST00000526966 RAVER2Q9HCJ3 691 aaKnown RBP22.36■■□□□ 1.17
CAPN1-206ENST00000526966 TMEM39AQ9NV64 488 aa22.36■■□□□ 1.17
CAPN1-206ENST00000526966 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-206ENST00000526966 FBXO40Q9UH90 709 aa22.36■■□□□ 1.17
CAPN1-206ENST00000526966 LRRC37A2A6NM11 1700 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 MYADML2A6NDP7 307 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 ADCY6O43306 1168 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 TTLL1O95922 423 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 ACVR2BQ13705 512 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 KCNA10Q16322 511 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 CHST13Q8NET6 341 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 MAFAQ8NHW3 353 aaPredicted RBP22.35■■□□□ 1.17
CAPN1-206ENST00000526966 ABHD16BQ9H3Z7 469 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 TBX21Q9UL17 535 aa22.35■■□□□ 1.17
CAPN1-206ENST00000526966 ELP1O95163 1332 aa22.34■■□□□ 1.17
CAPN1-206ENST00000526966 DCDC2CA8MYV0 355 aa22.34■■□□□ 1.17
CAPN1-206ENST00000526966 PATL2C9JE40 543 aaKnown RBP22.34■■□□□ 1.17
CAPN1-206ENST00000526966 IFNL3Q8IZI9 196 aa22.34■■□□□ 1.17
CAPN1-206ENST00000526966 LRRC47Q8N1G4 583 aaKnown RBP22.34■■□□□ 1.17
CAPN1-206ENST00000526966 NEDD1Q8NHV4 660 aa22.34■■□□□ 1.17
CAPN1-206ENST00000526966 MYLIPQ8WY64 445 aa22.34■■□□□ 1.17
CAPN1-206ENST00000526966 UPF3AQ9H1J1 476 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms