RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ADGBQ8N7X0 1667 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 PRR33A8MZF0 331 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 BIN1O00499 593 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 RGS13O14921 159 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 RAG1P15918 1043 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 ERCC5P28715 1186 aaPredicted RBP6.47□□□□□ -1.37
USP48-211ENST00000526044 GBP1P32455 592 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 CLCN7P51798 805 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 AOC3Q16853 763 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 BAHD1Q8TBE0 780 aaPredicted RBP6.47□□□□□ -1.37
USP48-211ENST00000526044 RASGRP4Q8TDF6 673 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 GPRASP2Q96D09 838 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 ATG4CQ96DT6 458 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 FERD3LQ96RJ6 166 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 CCSER2Q9H7U1 834 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 CNNM2Q9H8M5 875 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 SHANK2Q9UPX8 1470 aa6.47□□□□□ -1.37
USP48-211ENST00000526044 KIDINS220Q9ULH0 1771 aa6.46□□□□□ -1.37
USP48-211ENST00000526044 ATP7AQ04656 1500 aa6.46□□□□□ -1.37
USP48-211ENST00000526044 KDM5CP41229 1560 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 GJA8P48165 433 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 CHMP4BP1P59074 171 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 BNIP3Q12983 259 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 PKN1Q16512 942 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 OVOS1Q6IE37 1185 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 NLRC3Q7RTR2 1065 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 TMEM40Q8WWA1 233 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 SETD5Q9C0A6 1442 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 ACBD3Q9H3P7 528 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 GINM1Q9NU53 330 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 ZNRF3Q9ULT6 936 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 CAPN6Q9Y6Q1 641 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 ADGRL2O95490 1459 aa6.46□□□□□ -1.38
USP48-211ENST00000526044 DHX29Q7Z478 1369 aaKnown RBP6.45□□□□□ -1.38
USP48-211ENST00000526044 KIF15Q9NS87 1388 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 FRMPD1Q5SYB0 1578 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 HECW2Q9P2P5 1572 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 NAIPQ13075 1403 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 KIF3BO15066 747 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 CCNFP41002 786 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 CDKAL1Q5VV42 579 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 FBXW10Q5XX13 1052 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 SPRED2Q7Z698 418 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 PIWIL2Q8TC59 973 aaKnown RBP6.45□□□□□ -1.38
USP48-211ENST00000526044 RNF141Q8WVD5 230 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 ASB11Q8WXH4 323 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.45□□□□□ -1.38
USP48-211ENST00000526044 ANTXR1Q9H6X2 564 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 EFR3BQ9Y2G0 817 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 INPP5FQ9Y2H2 1132 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 ATP10AO60312 1499 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 ZMYM4Q5VZL5 1548 aa6.45□□□□□ -1.38
USP48-211ENST00000526044 HFM1A2PYH4 1435 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 ANKRD50Q9ULJ7 1429 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 YEATS2Q9ULM3 1422 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 DBX1A6NMT0 343 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 NME1P15531 152 aaKnown RBP6.44□□□□□ -1.38
USP48-211ENST00000526044 SOX9P48436 509 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 INTS3Q68E01 1043 aaKnown RBP6.44□□□□□ -1.38
USP48-211ENST00000526044 GGT6Q6P531 493 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 NFXL1Q6ZNB6 911 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 HSPA12BQ96MM6 686 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 KREMEN1Q96MU8 473 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 PAK6Q9NQU5 681 aaPredicted RBP6.44□□□□□ -1.38
USP48-211ENST00000526044 KCNH3Q9ULD8 1083 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 PPT2Q9UMR5 302 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 ST14Q9Y5Y6 855 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 A2MP01023 1474 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 ZFYVE16Q7Z3T8 1539 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 DUOX2Q9NRD8 1548 aa6.44□□□□□ -1.38
USP48-211ENST00000526044 ARID4BQ4LE39 1312 aaPredicted RBP6.44□□□□□ -1.38
USP48-211ENST00000526044 INO80Q9ULG1 1556 aaPredicted RBP6.44□□□□□ -1.38
USP48-211ENST00000526044 TNFRSF10CO14798 259 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 UBOX5O94941 541 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 CD8BP10966 210 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 TNK2Q07912 1038 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 FBLN7Q53RD9 439 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 RBBP8NLQ8NC74 664 aaPredicted RBP6.43□□□□□ -1.38
USP48-211ENST00000526044 SEC16BQ96JE7 1060 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 Q96M66 194 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 CRBNQ96SW2 442 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 ASPNQ9BXN1 380 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 KRTAP4-2Q9BYR5 136 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 SEMA3GQ9NS98 782 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 PITPNM2Q9BZ72 1349 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 PLXNC1O60486 1568 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 RAB3GAP2Q9H2M9 1393 aa6.43□□□□□ -1.38
USP48-211ENST00000526044 H3BS24 57 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 FARP2O94887 1054 aaPredicted RBP6.42□□□□□ -1.38
USP48-211ENST00000526044 POLR2BP30876 1174 aaKnown RBP6.42□□□□□ -1.38
USP48-211ENST00000526044 RNF4P78317 190 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 ZNF648Q5T619 568 aaPredicted RBP6.42□□□□□ -1.38
USP48-211ENST00000526044 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
USP48-211ENST00000526044 THAP5Q7Z6K1 395 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 VPS37DQ86XT2 251 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 TM9SF2Q99805 663 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 IGSF5Q9NSI5 407 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 DIP2CQ9Y2E4 1556 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 ABCA6Q8N139 1617 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms