RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 RPL10P27635 214 aaKnown RBP6.01□□□□□ -1.45
CD44-219ENST00000525685 RAP1GAPP47736 663 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 GJA8P48165 433 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 PCBP3P57721 371 aaKnown RBP6.01□□□□□ -1.45
CD44-219ENST00000525685 SNX17Q15036 470 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 BBS9Q3SYG4 887 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 WAPLQ7Z5K2 1190 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 SHISA4Q96DD7 197 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 SEC16BQ96JE7 1060 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 C8orf37Q96NL8 207 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 TANGO6Q9C0B7 1094 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 MKRN2Q9H000 416 aaKnown RBP6.01□□□□□ -1.45
CD44-219ENST00000525685 CWC22Q9HCG8 908 aaKnown RBP6.01□□□□□ -1.45
CD44-219ENST00000525685 MINPP1Q9UNW1 487 aa6.01□□□□□ -1.45
CD44-219ENST00000525685 YBX2Q9Y2T7 364 aaKnown RBP6.01□□□□□ -1.45
CD44-219ENST00000525685 UNC13AQ9UPW8 1703 aa6□□□□□ -1.45
CD44-219ENST00000525685 PSPNO60542 156 aa6□□□□□ -1.45
CD44-219ENST00000525685 EFEMP2O95967 443 aa6□□□□□ -1.45
CD44-219ENST00000525685 SYPP08247 313 aa6□□□□□ -1.45
CD44-219ENST00000525685 AUHQ13825 339 aaKnown RBP6□□□□□ -1.45
CD44-219ENST00000525685 CCDC81Q6ZN84 652 aa6□□□□□ -1.45
CD44-219ENST00000525685 IRF2BP1Q8IU81 584 aa6□□□□□ -1.45
CD44-219ENST00000525685 TAB3Q8N5C8 712 aaPredicted RBP6□□□□□ -1.45
CD44-219ENST00000525685 RASGRP4Q8TDF6 673 aa6□□□□□ -1.45
CD44-219ENST00000525685 MAP6Q96JE9 813 aa6□□□□□ -1.45
CD44-219ENST00000525685 DHRS1Q96LJ7 313 aa6□□□□□ -1.45
CD44-219ENST00000525685 SLC6A17Q9H1V8 727 aa6□□□□□ -1.45
CD44-219ENST00000525685 CHST7Q9NS84 486 aa6□□□□□ -1.45
CD44-219ENST00000525685 SUCOQ9UBS9 1254 aaKnown RBP6□□□□□ -1.45
CD44-219ENST00000525685 GPR160Q9UJ42 338 aa6□□□□□ -1.45
CD44-219ENST00000525685 PPT2Q9UMR5 302 aa6□□□□□ -1.45
CD44-219ENST00000525685 PCDHB12Q9Y5F1 795 aa6□□□□□ -1.45
CD44-219ENST00000525685 FAM86C2PA6NEL3 165 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 C9IYK1 514 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 USP2O75604 605 aaPredicted RBP5.99□□□□□ -1.45
CD44-219ENST00000525685 C1QTNF9P0C862 333 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 ATF4P18848 351 aaPredicted RBP5.99□□□□□ -1.45
CD44-219ENST00000525685 ATP2B1P20020 1258 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 EIF6P56537 245 aaKnown RBP5.99□□□□□ -1.45
CD44-219ENST00000525685 SF3A1Q15459 793 aaKnown RBP5.99□□□□□ -1.45
CD44-219ENST00000525685 ZPBP2Q6X784 338 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 SLC43A3Q8NBI5 491 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 RBBP8NLQ8NC74 664 aaPredicted RBP5.99□□□□□ -1.45
CD44-219ENST00000525685 ANAPC16Q96DE5 110 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 INTS4Q96HW7 963 aaKnown RBP5.99□□□□□ -1.45
CD44-219ENST00000525685 TM9SF2Q99805 663 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 TINF2Q9BSI4 451 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 SRRTQ9BXP5 876 aaKnown RBP5.99□□□□□ -1.45
CD44-219ENST00000525685 GFOD1Q9NXC2 390 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 PRR13Q9NZ81 148 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 ZMYM5Q9UJ78 669 aa5.99□□□□□ -1.45
CD44-219ENST00000525685 R3HCC1Q9Y3T6 440 aaKnown RBP5.99□□□□□ -1.45
CD44-219ENST00000525685 SSU72P8A0A1W2PR75 194 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 NFIBO00712 420 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 SHOXO15266 292 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 FKTNO75072 461 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 MED14OSP0DP75 135 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 CTSKP43235 329 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 KIR2DL1P43626 348 aaPredicted RBP5.98□□□□□ -1.45
CD44-219ENST00000525685 KIR2DL2P43627 348 aaPredicted RBP5.98□□□□□ -1.45
CD44-219ENST00000525685 SPOCD1Q6ZMY3 1216 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 NLRX1Q86UT6 975 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 C1QL4Q86Z23 238 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 HHIPL1Q96JK4 782 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 SLC26A8Q96RN1 970 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 FBXL21Q9UKT6 434 aa5.98□□□□□ -1.45
CD44-219ENST00000525685 ETV2O00321 342 aaPredicted RBP5.97□□□□□ -1.45
CD44-219ENST00000525685 NRDCO43847 1150 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 TMEM253P0C7T8 217 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 GLDCP23378 1020 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 CFPP27918 469 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 BMP8BP34820 402 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 GTF2F1P35269 517 aaKnown RBP eCLIP5.97□□□□□ -1.45
CD44-219ENST00000525685 SOX9P48436 509 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 GALK1P51570 392 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 PMS1P54277 932 aaKnown RBP5.97□□□□□ -1.45
CD44-219ENST00000525685 PPP2R5EQ16537 467 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 RUFY4Q6ZNE9 571 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 ANKLE2Q86XL3 938 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 C7orf61Q8IZ16 206 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 FCRL2Q96LA5 508 aaPredicted RBP5.97□□□□□ -1.45
CD44-219ENST00000525685 TOX2Q96NM4 488 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 CD320Q9NPF0 282 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 USP35Q9P2H5 1018 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 STRIP2Q9ULQ0 834 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 MRVI1Q9Y6F6 885 aa5.97□□□□□ -1.45
CD44-219ENST00000525685 SCRIBQ14160 1630 aa5.96□□□□□ -1.45
CD44-219ENST00000525685 MYOCOSA0A1B0GUC4 107 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 MEIS1O00470 390 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 STK10O94804 968 aaKnown RBP5.96□□□□□ -1.46
CD44-219ENST00000525685 ZNF205O95201 554 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 GUCY2CP25092 1073 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 ZYXQ15942 572 aaKnown RBP5.96□□□□□ -1.46
CD44-219ENST00000525685 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 ATG14Q6ZNE5 492 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 CEP128Q6ZU80 1094 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 PPFIBP1Q86W92 1011 aa5.96□□□□□ -1.46
CD44-219ENST00000525685 LSRQ86X29 649 aaPredicted RBP5.96□□□□□ -1.46
CD44-219ENST00000525685 CCDC144CPQ8IYA2 1237 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms