RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CCL15Q16663 113 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 IFIT1BQ5T764 474 aaKnown RBP7.61□□□□□ -1.19
CD44-214ENST00000525211 SLFN13Q68D06 897 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 DGKHQ86XP1 1220 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 ZNF654Q8IZM8 581 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 NECAB1Q8N987 351 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 PNMA1Q8ND90 353 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 SHISA4Q96DD7 197 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 HHIPL1Q96JK4 782 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 C12orf42Q96LP6 360 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 UBAC1Q9BSL1 405 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 RPAP3Q9H6T3 665 aaPredicted RBP7.61□□□□□ -1.19
CD44-214ENST00000525211 NCOA5Q9HCD5 579 aaKnown RBP7.61□□□□□ -1.19
CD44-214ENST00000525211 GPCPD1Q9NPB8 672 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 MAD2L2Q9UI95 211 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 CYP46A1Q9Y6A2 500 aa7.61□□□□□ -1.19
CD44-214ENST00000525211 KLF18A0A0U1RQI7 1052 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 hCG_1642624A0A1W2PR95 340 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 UNCXA6NJT0 531 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 ADAMTS3O15072 1205 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 GPR37O15354 613 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 CYTH3O43739 400 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 CTDNEP1O95476 244 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 ZBTB48P10074 688 aaPredicted RBP7.6□□□□□ -1.19
CD44-214ENST00000525211 PDIA3P30101 505 aaKnown RBP7.6□□□□□ -1.19
CD44-214ENST00000525211 ADD1P35611 737 aaKnown RBP7.6□□□□□ -1.19
CD44-214ENST00000525211 CCT2P78371 535 aaKnown RBP7.6□□□□□ -1.19
CD44-214ENST00000525211 ZNF543Q08ER8 600 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 FUT2Q10981 343 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 STK3Q13188 491 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 SNAPC2Q13487 334 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 ME3Q16798 604 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 APOA5Q6Q788 366 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 SGMS1Q86VZ5 419 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 IQCA1Q86XH1 822 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 SRBD1Q8N5C6 995 aaKnown RBP7.6□□□□□ -1.19
CD44-214ENST00000525211 GMCL1P1Q8NEA9 526 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 ATG4CQ96DT6 458 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 TMEM87BQ96K49 555 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 P2RX7Q99572 595 aaKnown RBP7.6□□□□□ -1.19
CD44-214ENST00000525211 FEZ1Q99689 392 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 ZNF287Q9HBT7 754 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 ARHGEF10LQ9HCE6 1279 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 TXNRD2Q9NNW7 524 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 GINM1Q9NU53 330 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 TSKSQ9UJT2 592 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 LOC285556D6RIA3 1793 aa7.6□□□□□ -1.19
CD44-214ENST00000525211 BAZ2BQ9UIF8 2168 aaKnown RBP7.6□□□□□ -1.19
CD44-214ENST00000525211 SMCHD1A6NHR9 2005 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 WDR19Q8NEZ3 1342 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 ADGRA2Q96PE1 1338 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 PALM3A6NDB9 673 aaPredicted RBP7.59□□□□□ -1.19
CD44-214ENST00000525211 PDHXO00330 501 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 PPP1R11O60927 126 aaPredicted RBP7.59□□□□□ -1.19
CD44-214ENST00000525211 TBC1D8O95759 1140 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 CETPP11597 493 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 PSMA5P28066 241 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 CTGFP29279 349 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 LIFRP42702 1097 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 TM4SF4P48230 202 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 GTF2A2P52657 109 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 EVCP57679 992 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 GRM4Q14833 912 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 Q3C1V9 767 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 CATSPERGQ6ZRH7 1159 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 MICU3Q86XE3 530 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 FBXL16Q8N461 479 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 KRI1Q8N9T8 703 aaKnown RBP7.59□□□□□ -1.19
CD44-214ENST00000525211 REPS2Q8NFH8 660 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 NUP133Q8WUM0 1156 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 PIBF1Q8WXW3 757 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 CCDC102AQ96A19 550 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 GMCL1Q96IK5 515 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 ASCC2Q9H1I8 757 aaPredicted RBP7.59□□□□□ -1.19
CD44-214ENST00000525211 ALDH8A1Q9H2A2 487 aaPredicted RBP7.59□□□□□ -1.19
CD44-214ENST00000525211 KAT14Q9H8E8 782 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 AS3MTQ9HBK9 375 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 BTBD7Q9P203 1132 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 AGTPBP1Q9UPW5 1226 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 THSD7BQ9C0I4 1608 aa7.59□□□□□ -1.19
CD44-214ENST00000525211 ZSWIM8A7E2V4 1837 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 C19orf81C9J6K1 198 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 TMEM232C9JQI7 657 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 HMGB1P09429 215 aaKnown RBP7.58□□□□□ -1.2
CD44-214ENST00000525211 BMP3P12645 472 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 HOXA7P31268 230 aaPredicted RBP7.58□□□□□ -1.2
CD44-214ENST00000525211 SCRN1Q12765 414 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 NTRK3Q16288 839 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 TMEM132AQ24JP5 1023 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 CCDC96Q2M329 555 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 NFXL1Q6ZNB6 911 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 ANKRD23Q86SG2 305 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 CCDC82Q8N4S0 544 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 PROCA1Q8NCQ7 364 aaPredicted RBP7.58□□□□□ -1.2
CD44-214ENST00000525211 KIFC2Q96AC6 838 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 AIFM3Q96NN9 605 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 VAT1LQ9HCJ6 419 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 RNF186Q9NXI6 227 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 TMOD4Q9NZQ9 345 aa7.58□□□□□ -1.2
CD44-214ENST00000525211 RBPJLQ9UBG7 517 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms