RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 DHX32Q7L7V1 743 aaKnown RBP4.71□□□□□ -1.66
CSDE1-209ENST00000525132 NECAB2Q7Z6G3 386 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 FRMD5Q7Z6J6 570 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 NLRP13Q86W25 1043 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 EDEM1Q92611 657 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 BHMTQ93088 406 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 BBC3Q96PG8 261 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-209ENST00000525132 TUT1Q9H6E5 874 aaKnown RBP4.71□□□□□ -1.66
CSDE1-209ENST00000525132 ANO2Q9NQ90 1003 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 DNAJB12Q9NXW2 375 aaKnown RBP4.71□□□□□ -1.66
CSDE1-209ENST00000525132 FAM13BQ9NYF5 915 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 TMEM63CQ9P1W3 806 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 POLIQ9UNA4 740 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-209ENST00000525132 ABCA2Q9BZC7 2435 aa4.71□□□□□ -1.66
CSDE1-209ENST00000525132 H0YIN7 160 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 PLA2G2AP14555 144 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 ATXN1P54253 815 aaKnown RBP4.7□□□□□ -1.66
CSDE1-209ENST00000525132 PLAURQ03405 335 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 SREBF2Q12772 1141 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 CCER1Q8TC90 406 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-209ENST00000525132 FOXD4L4Q8WXT5 416 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-209ENST00000525132 TTC9Q92623 222 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 ZNF622Q969S3 477 aaKnown RBP eCLIP4.7□□□□□ -1.66
CSDE1-209ENST00000525132 TRIM11Q96F44 468 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 LPIN3Q9BQK8 851 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 RBCK1Q9BYM8 510 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 FRRS1LQ9P0K9 344 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 PRR12Q9ULL5 1215 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 IVNS1ABPQ9Y6Y0 642 aa4.7□□□□□ -1.66
CSDE1-209ENST00000525132 COL3A1P02461 1466 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-209ENST00000525132 FLT4P35916 1363 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 LOC105371045A0A1W2PR82 267 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 A6NHS1 94 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 EIF4E1BA6NMX2 242 aaKnown RBP4.69□□□□□ -1.66
CSDE1-209ENST00000525132 TM4SF5O14894 197 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 ABL1P00519 1130 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 RARAP10276 462 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 COL8A1P27658 744 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 RBM25P49756 843 aaKnown RBP4.69□□□□□ -1.66
CSDE1-209ENST00000525132 MAP3K10Q02779 954 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 ZNF326Q5BKZ1 582 aaKnown RBP4.69□□□□□ -1.66
CSDE1-209ENST00000525132 ADAMTSL4Q6UY14 1074 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 FAM178BQ8IXR5 827 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 CMTR1Q8N1G2 835 aaKnown RBP4.69□□□□□ -1.66
CSDE1-209ENST00000525132 LBHD1Q9BQE6 289 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-209ENST00000525132 CNTN3Q9P232 1028 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 STK26Q9P289 416 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 CEP162Q5TB80 1403 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 CACNA1HO95180 2353 aa4.69□□□□□ -1.66
CSDE1-209ENST00000525132 DLEC1Q9Y238 1755 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 RAB3GAP2Q9H2M9 1393 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 SRRM3A6NNA2 597 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-209ENST00000525132 ADM5C9JUS6 153 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 POLRMTO00411 1230 aaKnown RBP4.68□□□□□ -1.66
CSDE1-209ENST00000525132 GPR182O15218 404 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 TNFRSF21O75509 655 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 CYP2E1P05181 493 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-209ENST00000525132 RPLP1P05386 114 aaKnown RBP4.68□□□□□ -1.66
CSDE1-209ENST00000525132 IL2RBP14784 551 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 EIF5P55010 431 aaKnown RBP4.68□□□□□ -1.66
CSDE1-209ENST00000525132 NEUROD1Q13562 356 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 PERM1Q5SV97 790 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 KRT25Q7Z3Z0 450 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 NGDNQ8NEJ9 315 aaKnown RBP4.68□□□□□ -1.66
CSDE1-209ENST00000525132 ZNF428Q96B54 188 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 ALKBH8Q96BT7 664 aaKnown RBP4.68□□□□□ -1.66
CSDE1-209ENST00000525132 ELP3Q9H9T3 547 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 ENAMQ9NRM1 1142 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 ABI2Q9NYB9 513 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-209ENST00000525132 GPRC5DQ9NZD1 345 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 SALL4Q9UJQ4 1053 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 CNTNAP5Q8WYK1 1306 aa4.68□□□□□ -1.66
CSDE1-209ENST00000525132 CCDC7Q96M83 1385 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 DOT1LQ8TEK3 1739 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 USP5P45974 858 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 EIF6P56537 245 aaKnown RBP4.67□□□□□ -1.66
CSDE1-209ENST00000525132 DNM1Q05193 864 aaKnown RBP4.67□□□□□ -1.66
CSDE1-209ENST00000525132 C19orf57Q0VDD7 668 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 CRHR2Q13324 411 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 DSC3Q14574 896 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 MOB2Q70IA6 237 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 BMP8AQ7Z5Y6 402 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 GLYCTKQ8IVS8 523 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 SUGP1Q8IWZ8 645 aaKnown RBP4.67□□□□□ -1.66
CSDE1-209ENST00000525132 CEP120Q8N960 986 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 CITED4Q96RK1 184 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 SUV39H2Q9H5I1 410 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 ANGPTL2Q9UKU9 493 aa4.67□□□□□ -1.66
CSDE1-209ENST00000525132 C1QTNF9BB2RNN3 333 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 PATL2C9JE40 543 aaKnown RBP4.66□□□□□ -1.66
CSDE1-209ENST00000525132 M0R082 166 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 C1QTNF9P0C862 333 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 RFC4P35249 363 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 AFF1P51825 1210 aaKnown RBP4.66□□□□□ -1.66
CSDE1-209ENST00000525132 VCPP55072 806 aaKnown RBP4.66□□□□□ -1.66
CSDE1-209ENST00000525132 ARHGEF6Q15052 776 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 C8orf86Q6ZUL3 223 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 KRT26Q7Z3Y9 468 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 C1orf127Q8N9H9 656 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms