RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 KCTD2Q14681 263 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 OLFML2BQ68BL8 750 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 LHX8Q68G74 356 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 SNRNP48Q6IEG0 339 aaKnown RBP21.97■■□□□ 1.11
CAPN1-203ENST00000525013 CWC27Q6UX04 472 aaKnown RBP21.97■■□□□ 1.11
CAPN1-203ENST00000525013 CPXCR1Q8N123 301 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 TEX13BQ9BXU2 312 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 FEM1BQ9UK73 627 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 TACC3Q9Y6A5 838 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 ALPK3Q96L96 1907 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 FRMPD3Q5JV73 1810 aa21.96■■□□□ 1.11
CAPN1-203ENST00000525013 ORC4O43929 436 aa21.96■■□□□ 1.11
CAPN1-203ENST00000525013 MNX1P50219 401 aaPredicted RBP21.96■■□□□ 1.11
CAPN1-203ENST00000525013 C11orf49Q9H6J7 331 aa21.96■■□□□ 1.11
CAPN1-203ENST00000525013 IL17RBQ9NRM6 502 aa21.96■■□□□ 1.11
CAPN1-203ENST00000525013 TMEM232C9JQI7 657 aa21.95■■□□□ 1.1
CAPN1-203ENST00000525013 HIP1O00291 1037 aa21.95■■□□□ 1.1
CAPN1-203ENST00000525013 PGK2P07205 417 aa21.95■■□□□ 1.1
CAPN1-203ENST00000525013 MCCP23508 829 aa21.95■■□□□ 1.1
CAPN1-203ENST00000525013 IKQ13123 557 aaPredicted RBP21.95■■□□□ 1.1
CAPN1-203ENST00000525013 TRPV1Q8NER1 839 aa21.95■■□□□ 1.1
CAPN1-203ENST00000525013 DDX20Q9UHI6 824 aaKnown RBP21.95■■□□□ 1.1
CAPN1-203ENST00000525013 MTMR7Q9Y216 660 aa21.95■■□□□ 1.1
CAPN1-203ENST00000525013 SMCHD1A6NHR9 2005 aa21.95■■□□□ 1.1
CAPN1-203ENST00000525013 CYBAP13498 195 aa21.94■■□□□ 1.1
CAPN1-203ENST00000525013 SLC1A4P43007 532 aa21.94■■□□□ 1.1
CAPN1-203ENST00000525013 HABP4Q5JVS0 413 aaKnown RBP21.94■■□□□ 1.1
CAPN1-203ENST00000525013 MAML3Q96JK9 1138 aa21.94■■□□□ 1.1
CAPN1-203ENST00000525013 RAVER2Q9HCJ3 691 aaKnown RBP21.94■■□□□ 1.1
CAPN1-203ENST00000525013 COLQQ9Y215 455 aaPredicted RBP21.94■■□□□ 1.1
CAPN1-203ENST00000525013 ZMYM6O95789 1325 aa21.94■■□□□ 1.1
CAPN1-203ENST00000525013 MSCO60682 206 aa21.93■■□□□ 1.1
CAPN1-203ENST00000525013 IGHA2P01877 340 aa21.93■■□□□ 1.1
CAPN1-203ENST00000525013 FGRP09769 529 aa21.93■■□□□ 1.1
CAPN1-203ENST00000525013 MFSD6Q6ZSS7 791 aa21.93■■□□□ 1.1
CAPN1-203ENST00000525013 CHURC1Q8WUH1 139 aa21.93■■□□□ 1.1
CAPN1-203ENST00000525013 GMCL1Q96IK5 515 aa21.93■■□□□ 1.1
CAPN1-203ENST00000525013 SLC38A10Q9HBR0 1119 aa21.93■■□□□ 1.1
CAPN1-203ENST00000525013 RIPK3Q9Y572 518 aa21.93■■□□□ 1.1
CAPN1-203ENST00000525013 PDE4AP27815 886 aa21.92■■□□□ 1.1
CAPN1-203ENST00000525013 STAT2P52630 851 aa21.92■■□□□ 1.1
CAPN1-203ENST00000525013 PRAMEF19Q5SWL8 479 aa21.92■■□□□ 1.1
CAPN1-203ENST00000525013 DDX11Q96FC9 970 aa21.92■■□□□ 1.1
CAPN1-203ENST00000525013 ATP2A1O14983 1001 aa21.91■■□□□ 1.1
CAPN1-203ENST00000525013 AKNAD1Q5T1N1 836 aa21.91■■□□□ 1.1
CAPN1-203ENST00000525013 ANO1Q5XXA6 986 aa21.91■■□□□ 1.1
CAPN1-203ENST00000525013 CHRDL2Q6WN34 429 aa21.91■■□□□ 1.1
CAPN1-203ENST00000525013 KCTD1Q719H9 257 aa21.91■■□□□ 1.1
CAPN1-203ENST00000525013 FAM160B2Q86V87 743 aa21.91■■□□□ 1.1
CAPN1-203ENST00000525013 C7orf61Q8IZ16 206 aa21.91■■□□□ 1.1
CAPN1-203ENST00000525013 STAG1Q8WVM7 1258 aa21.91■■□□□ 1.1
CAPN1-203ENST00000525013 SLC34A2O95436 690 aa21.9■■□□□ 1.1
CAPN1-203ENST00000525013 FDX1P10109 184 aa21.9■■□□□ 1.1
CAPN1-203ENST00000525013 CCDC96Q2M329 555 aa21.9■■□□□ 1.1
CAPN1-203ENST00000525013 ZNF792Q3KQV3 632 aa21.9■■□□□ 1.1
CAPN1-203ENST00000525013 RCSD1Q6JBY9 416 aa21.9■■□□□ 1.1
CAPN1-203ENST00000525013 TINF2Q9BSI4 451 aa21.9■■□□□ 1.1
CAPN1-203ENST00000525013 RNF41Q9H4P4 317 aaPredicted RBP21.9■■□□□ 1.1
CAPN1-203ENST00000525013 DIS3Q9Y2L1 958 aaKnown RBP21.9■■□□□ 1.1
CAPN1-203ENST00000525013 PFASO15067 1338 aa21.89■■□□□ 1.1
CAPN1-203ENST00000525013 ZNF213O14771 459 aa21.89■■□□□ 1.09
CAPN1-203ENST00000525013 SEPT4O43236 478 aa21.89■■□□□ 1.09
CAPN1-203ENST00000525013 OAZ1P54368 228 aa21.89■■□□□ 1.09
CAPN1-203ENST00000525013 TTC22Q5TAA0 569 aa21.89■■□□□ 1.09
CAPN1-203ENST00000525013 RASGRP2Q7LDG7 609 aa21.89■■□□□ 1.09
CAPN1-203ENST00000525013 TBC1D10CQ8IV04 446 aa21.89■■□□□ 1.09
CAPN1-203ENST00000525013 HOMER2Q9NSB8 354 aa21.89■■□□□ 1.09
CAPN1-203ENST00000525013 MYCNP04198 464 aaPredicted RBP21.88■■□□□ 1.09
CAPN1-203ENST00000525013 TOP1P11387 765 aaKnown RBP21.88■■□□□ 1.09
CAPN1-203ENST00000525013 PCP11498 1178 aaKnown RBP21.88■■□□□ 1.09
CAPN1-203ENST00000525013 COL6A1P12109 1028 aa21.88■■□□□ 1.09
CAPN1-203ENST00000525013 ANKRD35Q8N283 1001 aa21.88■■□□□ 1.09
CAPN1-203ENST00000525013 TMEM47Q9BQJ4 181 aa21.88■■□□□ 1.09
CAPN1-203ENST00000525013 TCP11L1Q9NUJ3 509 aa21.88■■□□□ 1.09
CAPN1-203ENST00000525013 FBXO40Q9UH90 709 aa21.88■■□□□ 1.09
CAPN1-203ENST00000525013 LAMA4Q16363 1823 aa21.87■■□□□ 1.09
CAPN1-203ENST00000525013 MCM3APO60318 1980 aa21.87■■□□□ 1.09
CAPN1-203ENST00000525013 PLA2G6O60733 806 aa21.87■■□□□ 1.09
CAPN1-203ENST00000525013 NOVP48745 357 aa21.87■■□□□ 1.09
CAPN1-203ENST00000525013 ARRDC4Q8NCT1 418 aa21.87■■□□□ 1.09
CAPN1-203ENST00000525013 CHST13Q8NET6 341 aa21.87■■□□□ 1.09
CAPN1-203ENST00000525013 DCAF4Q8WV16 495 aa21.87■■□□□ 1.09
CAPN1-203ENST00000525013 SENP6Q9GZR1 1112 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-203ENST00000525013 DNAH12Q6ZR08 3092 aa21.87■■□□□ 1.09
CAPN1-203ENST00000525013 GSPT1P15170 499 aaKnown RBP21.86■■□□□ 1.09
CAPN1-203ENST00000525013 SNAP25P60880 206 aa21.86■■□□□ 1.09
CAPN1-203ENST00000525013 GJC2Q5T442 439 aaPredicted RBP21.86■■□□□ 1.09
CAPN1-203ENST00000525013 CCDC174Q6PII3 467 aa21.86■■□□□ 1.09
CAPN1-203ENST00000525013 ESR2Q92731 530 aa21.86■■□□□ 1.09
CAPN1-203ENST00000525013 AGBL1Q96MI9 1066 aa21.86■■□□□ 1.09
CAPN1-203ENST00000525013 DSCC1Q9BVC3 393 aa21.86■■□□□ 1.09
CAPN1-203ENST00000525013 NRBP1Q9UHY1 535 aa21.86■■□□□ 1.09
CAPN1-203ENST00000525013 PRR12Q9ULL5 1215 aa21.86■■□□□ 1.09
CAPN1-203ENST00000525013 ZMYND8Q9ULU4 1186 aaPredicted RBP21.86■■□□□ 1.09
CAPN1-203ENST00000525013 CNPY2Q9Y2B0 182 aa21.86■■□□□ 1.09
CAPN1-203ENST00000525013 NEDD4P46934 1319 aa21.85■■□□□ 1.09
CAPN1-203ENST00000525013 DNM1LO00429 736 aa21.85■■□□□ 1.09
CAPN1-203ENST00000525013 TAL1P17542 331 aaPredicted RBP21.85■■□□□ 1.09
CAPN1-203ENST00000525013 CTNNA3Q9UI47 895 aa21.85■■□□□ 1.09
CAPN1-203ENST00000525013 DNAJC25-GNG10A0A024R161 153 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms