RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 PAWRQ96IZ0 340 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
TRAPPC4-204ENST00000524797 ZBED4O75132 1171 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 CYP2C19P33261 490 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 RRP12Q5JTH9 1297 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 TTC22Q5TAA0 569 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 LHX8Q68G74 356 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 NECAB2Q7Z6G3 386 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 GMCL1Q96IK5 515 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 TOMM22Q9NS69 142 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.29
TRAPPC4-204ENST00000524797 H0YGN5 161 aa13.21□□□□□ -0.3
TRAPPC4-204ENST00000524797 CYBAP13498 195 aa13.21□□□□□ -0.3
TRAPPC4-204ENST00000524797 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.3
TRAPPC4-204ENST00000524797 SNRNP48Q6IEG0 339 aaKnown RBP13.21□□□□□ -0.3
TRAPPC4-204ENST00000524797 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.3
TRAPPC4-204ENST00000524797 TEX13BQ9BXU2 312 aa13.21□□□□□ -0.3
TRAPPC4-204ENST00000524797 SLC38A10Q9HBR0 1119 aa13.21□□□□□ -0.3
TRAPPC4-204ENST00000524797 STX8Q9UNK0 236 aa13.21□□□□□ -0.3
TRAPPC4-204ENST00000524797 TMEM232C9JQI7 657 aa13.2□□□□□ -0.3
TRAPPC4-204ENST00000524797 ATP2A1O14983 1001 aa13.2□□□□□ -0.3
TRAPPC4-204ENST00000524797 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
TRAPPC4-204ENST00000524797 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
TRAPPC4-204ENST00000524797 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
TRAPPC4-204ENST00000524797 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
TRAPPC4-204ENST00000524797 CTDP1Q9Y5B0 961 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-204ENST00000524797 MCM3APO60318 1980 aa13.2□□□□□ -0.3
TRAPPC4-204ENST00000524797 SMCHD1A6NHR9 2005 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 PGK2P07205 417 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 MCCP23508 829 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 KCTD2Q14681 263 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 MFSD6Q6ZSS7 791 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 C11orf49Q9H6J7 331 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 RAVER2Q9HCJ3 691 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 TCP11L1Q9NUJ3 509 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 ISY1Q9ULR0 285 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 PLA2G6O60733 806 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 CNGA1P29973 690 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 SLC1A4P43007 532 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 STAT2P52630 851 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 OAZ1P54368 228 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 ZNF792Q3KQV3 632 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 RCSD1Q6JBY9 416 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 RASGRP2Q7LDG7 609 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 CHURC1Q8WUH1 139 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 DSCC1Q9BVC3 393 aa13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-204ENST00000524797 FDX1P10109 184 aa13.18□□□□□ -0.3
TRAPPC4-204ENST00000524797 TOP1P11387 765 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-204ENST00000524797 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
TRAPPC4-204ENST00000524797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAPPC4-204ENST00000524797 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
TRAPPC4-204ENST00000524797 TMEM47Q9BQJ4 181 aa13.18□□□□□ -0.3
TRAPPC4-204ENST00000524797 RNF41Q9H4P4 317 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-204ENST00000524797 NEDD4P46934 1319 aa13.18□□□□□ -0.3
TRAPPC4-204ENST00000524797 ZNF213O14771 459 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 MSCO60682 206 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 LCTP09848 1927 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 PRAMEF19Q5SWL8 479 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 KCTD1Q719H9 257 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 IL25Q9H293 177 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 NR2E3Q9Y5X4 410 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 CEP290O15078 2479 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 PFASO15067 1338 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 EVI5O60447 810 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 COL6A1P12109 1028 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 IKQ13123 557 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 CCDC96Q2M329 555 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
TRAPPC4-204ENST00000524797 ZNF536O15090 1300 aa13.16□□□□□ -0.3
TRAPPC4-204ENST00000524797 RAD50Q92878 1312 aa13.16□□□□□ -0.3
TRAPPC4-204ENST00000524797 DNAJC25-GNG10A0A024R161 153 aa13.16□□□□□ -0.3
TRAPPC4-204ENST00000524797 TINF2Q9BSI4 451 aa13.16□□□□□ -0.3
TRAPPC4-204ENST00000524797 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
TRAPPC4-204ENST00000524797 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
TRAPPC4-204ENST00000524797 PRR12Q9ULL5 1215 aa13.16□□□□□ -0.3
TRAPPC4-204ENST00000524797 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
TRAPPC4-204ENST00000524797 SEPT4O43236 478 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 SNAP25P60880 206 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 HABP4Q5JVS0 413 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 ESR2Q92731 530 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 DDX11Q96FC9 970 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 TTC14Q96N46 770 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 CTNNA3Q9UI47 895 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 CHMLP26374 656 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 NT5C2P49902 561 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 TTBK2Q6IQ55 1244 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 CCDC174Q6PII3 467 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 BTNL9Q6UXG8 535 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 C7orf61Q8IZ16 206 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms