RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PBRM1Q86U86 1689 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 EIF4G3O43432 1585 aaKnown RBP4.95□□□□□ -1.62
CSDE1-208ENST00000524652 MYOCOSA0A1B0GUC4 107 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 TNFRSF10CO14798 259 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 SIGLEC6O43699 453 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 PSPNO60542 156 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 RPL10P27635 214 aaKnown RBP4.95□□□□□ -1.62
CSDE1-208ENST00000524652 POLR2BP30876 1174 aaKnown RBP4.95□□□□□ -1.62
CSDE1-208ENST00000524652 ZNF165P49910 485 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 SEZ6Q53EL9 994 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 WAPLQ7Z5K2 1190 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 TMC3Q7Z5M5 1100 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 ZNF605Q86T29 641 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 NLRX1Q86UT6 975 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 SLITRK4Q8IW52 837 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 MAP6Q96JE9 813 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 NT5C1AQ9BXI3 368 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 FOXP3Q9BZS1 431 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 ZNF552Q9H707 407 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-208ENST00000524652 UBP1Q9NZI7 540 aa4.95□□□□□ -1.62
CSDE1-208ENST00000524652 ZNF608Q9ULD9 1512 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-208ENST00000524652 ABCA5Q8WWZ7 1642 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 TEX51A0A1B0GUA7 166 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 SSU72P8A0A1W2PR75 194 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 TMEM82A0PJX8 343 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 OR14I1A6ND48 311 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 NOTOA8MTQ0 251 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 HRKO00198 91 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 NRDCO43847 1150 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 USP2O75604 605 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-208ENST00000524652 PRAMEF1O95521 474 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 NME1P15531 152 aaKnown RBP4.94□□□□□ -1.62
CSDE1-208ENST00000524652 ENDOUP21128 410 aaKnown RBP4.94□□□□□ -1.62
CSDE1-208ENST00000524652 PDE6BP35913 854 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 DLG4P78352 724 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 SNW1Q13573 536 aaKnown RBP4.94□□□□□ -1.62
CSDE1-208ENST00000524652 BBS9Q3SYG4 887 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 GK5Q6ZS86 529 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 CRTAC1Q9NQ79 661 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 PRR13Q9NZ81 148 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 ZMYM5Q9UJ78 669 aa4.94□□□□□ -1.62
CSDE1-208ENST00000524652 NUAK1O60285 661 aa4.93□□□□□ -1.62
CSDE1-208ENST00000524652 CLCQ05315 142 aa4.93□□□□□ -1.62
CSDE1-208ENST00000524652 CEP128Q6ZU80 1094 aa4.93□□□□□ -1.62
CSDE1-208ENST00000524652 NKD1Q969G9 470 aa4.93□□□□□ -1.62
CSDE1-208ENST00000524652 FCRL2Q96LA5 508 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-208ENST00000524652 PRDM14Q9GZV8 571 aa4.93□□□□□ -1.62
CSDE1-208ENST00000524652 IFT140Q96RY7 1462 aa4.93□□□□□ -1.62
CSDE1-208ENST00000524652 ABCA10Q8WWZ4 1543 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 DISP3Q9P2K9 1392 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 EFEMP2O95967 443 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 SYPP08247 313 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 MCM4P33991 863 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 SLC14A2Q15849 920 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 ADGRF1Q5T601 910 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 TMEM132EQ6IEE7 984 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 KIAA0825Q8IV33 1275 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 HHIPL1Q96JK4 782 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 SLC6A18Q96N87 628 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 MKRN2Q9H000 416 aaKnown RBP4.92□□□□□ -1.62
CSDE1-208ENST00000524652 GCM1Q9NP62 436 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 CHST7Q9NS84 486 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 TNFRSF10DQ9UBN6 386 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 PCDHB12Q9Y5F1 795 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 RUSC2Q8N2Y8 1516 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 CHD1O14646 1710 aa4.92□□□□□ -1.62
CSDE1-208ENST00000524652 SOGA1O94964 1423 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 FKTNO75072 461 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 IMPDH2P12268 514 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 BMP8BP34820 402 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 GALK1P51570 392 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 RTP1P59025 263 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 OLFML2BQ68BL8 750 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 INTS3Q68E01 1043 aaKnown RBP4.91□□□□□ -1.62
CSDE1-208ENST00000524652 TTLL10Q6ZVT0 673 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 TMEM192Q8IY95 271 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 TMEM87AQ8NBN3 555 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 ZNF512BQ96KM6 892 aaPredicted RBP4.91□□□□□ -1.62
CSDE1-208ENST00000524652 DHRS1Q96LJ7 313 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 SPON2Q9BUD6 331 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 ANTXR1Q9H6X2 564 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 ZNRF3Q9ULT6 936 aa4.91□□□□□ -1.62
CSDE1-208ENST00000524652 AQRO60306 1485 aaKnown RBP eCLIP4.91□□□□□ -1.621e-8■□□□□ 9.3
CSDE1-208ENST00000524652 FADS2P1A8MWK0 482 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 RFXAPO00287 272 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 ZNF205O95201 554 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 PNLIPP16233 465 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 ZNF16P17020 682 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-208ENST00000524652 AUHQ13825 339 aaKnown RBP4.9□□□□□ -1.63
CSDE1-208ENST00000524652 LDLRAD1Q5T700 205 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 LILRA6Q6PI73 481 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 SIRT2Q8IXJ6 389 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 TAB3Q8N5C8 712 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-208ENST00000524652 EAF1Q96JC9 268 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-208ENST00000524652 SLC9A7Q96T83 725 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 IRF2BPLQ9H1B7 796 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 METTL5Q9NRN9 209 aaKnown RBP4.9□□□□□ -1.63
CSDE1-208ENST00000524652 ERVK13-1Q9NX77 482 aa4.9□□□□□ -1.63
CSDE1-208ENST00000524652 SUCOQ9UBS9 1254 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms