RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 GABRQQ9UN88 632 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 RLFQ13129 1914 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 A0A0G2JMZ2 1700 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 ADCY3O60266 1144 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 ERCC3P19447 782 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 PTPREP23469 700 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 MCM5P33992 734 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 RGS2P41220 211 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 ZNF543Q08ER8 600 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 IKQ13123 557 aaPredicted RBP11.86□□□□□ -0.51
TTC39A-213ENST00000524442 KRT32Q14532 448 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 PLS1Q14651 629 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 SEC23AQ15436 765 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 CCDC96Q2M329 555 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 MORN1Q5T089 497 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 MB21D2Q8IYB1 491 aaPredicted RBP11.86□□□□□ -0.51
TTC39A-213ENST00000524442 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 USP6NLQ92738 828 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 PNMA2Q9UL42 364 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 ZNF214Q9UL59 606 aaPredicted RBP11.86□□□□□ -0.51
TTC39A-213ENST00000524442 TAF6LQ9Y6J9 622 aa11.86□□□□□ -0.51
TTC39A-213ENST00000524442 CCDC85CA6NKD9 419 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 IFIT3O14879 490 aaKnown RBP11.85□□□□□ -0.51
TTC39A-213ENST00000524442 HOXC6P09630 235 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 MAP2K5Q13163 448 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 GRB14Q14449 540 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 WTAPQ15007 396 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 ASPRV1Q53RT3 343 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 WDR78Q5VTH9 848 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 TMTC2Q8N394 836 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 KCNB2Q92953 911 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 ZNF333Q96JL9 665 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 TMEM87BQ96K49 555 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 SLC5A4Q9NY91 659 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 MTMR7Q9Y216 660 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 MGAMO43451 1857 aa11.85□□□□□ -0.51
TTC39A-213ENST00000524442 ZSWIM8A7E2V4 1837 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 HMGB1P09429 215 aaKnown RBP11.84□□□□□ -0.51
TTC39A-213ENST00000524442 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
TTC39A-213ENST00000524442 FCER1AP12319 257 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 HSPA4P34932 840 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 UBXN2AP68543 259 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 TKFCQ3LXA3 575 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 TMEM67Q5HYA8 995 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 SYDE2Q5VT97 1194 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
TTC39A-213ENST00000524442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
TTC39A-213ENST00000524442 CHST13Q8NET6 341 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 IGDCC4Q8TDY8 1250 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 APBA2Q99767 749 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 PRR12Q9ULL5 1215 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
TTC39A-213ENST00000524442 PARP14Q460N5 1801 aa11.83□□□□□ -0.51
TTC39A-213ENST00000524442 PRC1O43663 620 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 HMGCRP04035 888 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 CYP2B6P20813 491 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 LIFRP42702 1097 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 ANTXR2P58335 489 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 KCTD2Q14681 263 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 CPXCR1Q8N123 301 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 NEK1Q96PY6 1258 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 RANBP17Q9H2T7 1088 aaKnown RBP11.83□□□□□ -0.52
TTC39A-213ENST00000524442 RAVER2Q9HCJ3 691 aaKnown RBP11.83□□□□□ -0.52
TTC39A-213ENST00000524442 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
TTC39A-213ENST00000524442 BIN2Q9UBW5 565 aaPredicted RBP11.83□□□□□ -0.52
TTC39A-213ENST00000524442 FRMPD2Q68DX3 1309 aaPredicted RBP11.83□□□□□ -0.52
TTC39A-213ENST00000524442 ICAM1P05362 532 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 CAPN2P17655 700 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 ADORA2AP29274 412 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 TTBK2Q6IQ55 1244 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 DHX32Q7L7V1 743 aaKnown RBP11.82□□□□□ -0.52
TTC39A-213ENST00000524442 RASGRP2Q7LDG7 609 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 CHST3Q7LGC8 479 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 CATIPQ7Z7H3 387 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 DPP9Q86TI2 863 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 CHMP4CQ96CF2 233 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 MMP19Q99542 508 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 DIS3Q9Y2L1 958 aaKnown RBP11.82□□□□□ -0.52
TTC39A-213ENST00000524442 ZNF536O15090 1300 aa11.82□□□□□ -0.52
TTC39A-213ENST00000524442 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
TTC39A-213ENST00000524442 DDAH1O94760 285 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 INHAP05111 366 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 ELNP15502 786 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 PSMA5P28066 241 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 SLC16A2P36021 539 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 TROAPQ12815 778 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 USP26Q9BXU7 913 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 LY9Q9HBG7 655 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 RIPK3Q9Y572 518 aa11.81□□□□□ -0.52
TTC39A-213ENST00000524442 ZNF236Q9UL36 1845 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms