RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 SYPP08247 313 aa8.58□□□□□ -1.04
CPNE3-207ENST00000523588 BMP8BP34820 402 aa8.58□□□□□ -1.04
CPNE3-207ENST00000523588 GTF2F1P35269 517 aaKnown RBP eCLIP8.58□□□□□ -1.04
CPNE3-207ENST00000523588 PCBP3P57721 371 aaKnown RBP8.58□□□□□ -1.04
CPNE3-207ENST00000523588 RBL2Q08999 1139 aa8.58□□□□□ -1.04
CPNE3-207ENST00000523588 RAB33AQ14088 237 aa8.58□□□□□ -1.04
CPNE3-207ENST00000523588 SF3A1Q15459 793 aaKnown RBP8.58□□□□□ -1.04
CPNE3-207ENST00000523588 MRM1Q6IN84 353 aaKnown RBP8.58□□□□□ -1.04
CPNE3-207ENST00000523588 CRTC3Q6UUV7 619 aa8.58□□□□□ -1.04
CPNE3-207ENST00000523588 FIBCD1Q8N539 461 aa8.58□□□□□ -1.04
CPNE3-207ENST00000523588 SREK1Q8WXA9 508 aaKnown RBP8.58□□□□□ -1.04
CPNE3-207ENST00000523588 ADAMTS10Q9H324 1103 aa8.58□□□□□ -1.04
CPNE3-207ENST00000523588 CTNND2Q9UQB3 1225 aa8.58□□□□□ -1.04
CPNE3-207ENST00000523588 R3HCC1Q9Y3T6 440 aaKnown RBP8.58□□□□□ -1.04
CPNE3-207ENST00000523588 H0Y8X5 98 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 DDAH1O94760 285 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 ZNF205O95201 554 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 GSNP06396 782 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 ZNF143P52747 638 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-207ENST00000523588 GBP3Q9H0R5 595 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 NOL6Q9H6R4 1146 aaKnown RBP8.57□□□□□ -1.04
CPNE3-207ENST00000523588 ST7Q9NRC1 585 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 APEX2Q9UBZ4 518 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 EBF1Q9UH73 591 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 TMEM59LQ9UK28 342 aa8.57□□□□□ -1.04
CPNE3-207ENST00000523588 ZGLP1P0C6A0 271 aa8.56□□□□□ -1.04
CPNE3-207ENST00000523588 VAV1P15498 845 aa8.56□□□□□ -1.04
CPNE3-207ENST00000523588 GDNFP39905 211 aa8.56□□□□□ -1.04
CPNE3-207ENST00000523588 DDR2Q16832 855 aa8.56□□□□□ -1.04
CPNE3-207ENST00000523588 ADAT2Q7Z6V5 191 aaKnown RBP8.56□□□□□ -1.04
CPNE3-207ENST00000523588 CKAP2LQ8IYA6 745 aa8.56□□□□□ -1.04
CPNE3-207ENST00000523588 ARHGEF39Q8N4T4 335 aa8.56□□□□□ -1.04
CPNE3-207ENST00000523588 ADCY4Q8NFM4 1077 aa8.56□□□□□ -1.04
CPNE3-207ENST00000523588 RCC1LQ96I51 464 aaKnown RBP8.56□□□□□ -1.04
CPNE3-207ENST00000523588 G6PC3Q9BUM1 346 aa8.56□□□□□ -1.04
CPNE3-207ENST00000523588 DIS3Q9Y2L1 958 aaKnown RBP8.56□□□□□ -1.04
CPNE3-207ENST00000523588 PPM1BO75688 479 aa8.55□□□□□ -1.04
CPNE3-207ENST00000523588 IRAK1P51617 712 aa8.55□□□□□ -1.04
CPNE3-207ENST00000523588 ZPBP2Q6X784 338 aa8.55□□□□□ -1.04
CPNE3-207ENST00000523588 FLAD1Q8NFF5 587 aa8.55□□□□□ -1.04
CPNE3-207ENST00000523588 LINC01599Q8WXQ3 324 aa8.55□□□□□ -1.04
CPNE3-207ENST00000523588 APBA2Q99767 749 aa8.55□□□□□ -1.04
CPNE3-207ENST00000523588 SLC12A9Q9BXP2 914 aa8.55□□□□□ -1.04
CPNE3-207ENST00000523588 SF3B6Q9Y3B4 125 aaKnown RBP8.55□□□□□ -1.04
CPNE3-207ENST00000523588 SSU72P8A0A1W2PR75 194 aa8.54□□□□□ -1.04
CPNE3-207ENST00000523588 FKTNO75072 461 aa8.54□□□□□ -1.04
CPNE3-207ENST00000523588 RPL10P27635 214 aaKnown RBP8.54□□□□□ -1.04
CPNE3-207ENST00000523588 PPP2R5DQ14738 602 aa8.54□□□□□ -1.04
CPNE3-207ENST00000523588 RTP2Q5QGT7 225 aa8.54□□□□□ -1.04
CPNE3-207ENST00000523588 CCDC120Q96HB5 630 aa8.54□□□□□ -1.04
CPNE3-207ENST00000523588 ZDHHC15Q96MV8 337 aa8.54□□□□□ -1.04
CPNE3-207ENST00000523588 HIRIP3Q9BW71 556 aaPredicted RBP8.54□□□□□ -1.04
CPNE3-207ENST00000523588 SP110Q9HB58 689 aa8.54□□□□□ -1.04
CPNE3-207ENST00000523588 CGGBP1Q9UFW8 167 aaPredicted RBP8.54□□□□□ -1.04
CPNE3-207ENST00000523588 SUSD5O60279 629 aa8.53□□□□□ -1.04
CPNE3-207ENST00000523588 ITGB5P18084 799 aa8.53□□□□□ -1.04
CPNE3-207ENST00000523588 HK2P52789 917 aa8.53□□□□□ -1.04
CPNE3-207ENST00000523588 NBPF6Q5VWK0 638 aa8.53□□□□□ -1.04
CPNE3-207ENST00000523588 CWF19L1Q69YN2 538 aaKnown RBP8.53□□□□□ -1.04
CPNE3-207ENST00000523588 WAPLQ7Z5K2 1190 aa8.53□□□□□ -1.04
CPNE3-207ENST00000523588 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
CPNE3-207ENST00000523588 NBPF4Q96M43 638 aa8.53□□□□□ -1.04
CPNE3-207ENST00000523588 NAT2P11245 290 aa8.52□□□□□ -1.05
CPNE3-207ENST00000523588 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-207ENST00000523588 ERVFC1P60507 584 aa8.52□□□□□ -1.05
CPNE3-207ENST00000523588 FCRL3Q96P31 734 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-207ENST00000523588 MCMBPQ9BTE3 642 aa8.52□□□□□ -1.05
CPNE3-207ENST00000523588 TRIM55Q9BYV6 548 aa8.52□□□□□ -1.05
CPNE3-207ENST00000523588 PPP1R1BQ9UD71 204 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-207ENST00000523588 SUGT1Q9Y2Z0 365 aa8.52□□□□□ -1.05
CPNE3-207ENST00000523588 EMC9Q9Y3B6 208 aa8.52□□□□□ -1.05
CPNE3-207ENST00000523588 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.05
CPNE3-207ENST00000523588 PAPLNO95428 1278 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 HPXP02790 462 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 TAL1P17542 331 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-207ENST00000523588 POU4F1Q01851 419 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 SERINC3Q13530 473 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 BVESQ8NE79 360 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 PDZD8Q8NEN9 1154 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 MRGPRX3Q96LB0 322 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 LGR4Q9BXB1 951 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 AKT3Q9Y243 479 aa8.51□□□□□ -1.05
CPNE3-207ENST00000523588 VAMP4O75379 141 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 DUSP4Q13115 394 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 GRB10Q13322 594 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 FYB2Q5VWT5 728 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 EEPD1Q7L9B9 569 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 MAP6Q96JE9 813 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 DRC1Q96MC2 740 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 ERVK13-1Q9NX77 482 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 ZMYM5Q9UJ78 669 aa8.5□□□□□ -1.05
CPNE3-207ENST00000523588 CD3EP07766 207 aa8.49□□□□□ -1.05
CPNE3-207ENST00000523588 GSTM1P09488 218 aa8.49□□□□□ -1.05
CPNE3-207ENST00000523588 IFNGR1P15260 489 aa8.49□□□□□ -1.05
CPNE3-207ENST00000523588 ENDOUP21128 410 aaKnown RBP8.49□□□□□ -1.05
CPNE3-207ENST00000523588 NOP2P46087 812 aaKnown RBP8.49□□□□□ -1.05
CPNE3-207ENST00000523588 SLC10A6Q3KNW5 377 aa8.49□□□□□ -1.05
CPNE3-207ENST00000523588 SV2CQ496J9 727 aa8.49□□□□□ -1.05
CPNE3-207ENST00000523588 TMEM52Q8NDY8 209 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms