RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 DAGLBQ8NCG7 672 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 UBXN4Q92575 508 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 PRDM14Q9GZV8 571 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 FAM86C1Q9NVL1 165 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 FAM53CQ9NYF3 392 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 R3HCC1Q9Y3T6 440 aaKnown RBP7.22□□□□□ -1.25
PCM1-219ENST00000523540 SHISA3A0PJX4 238 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 LRRC10BA6NIK2 292 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.21□□□□□ -1.26
PCM1-219ENST00000523540 H3BS24 57 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 CBFA2T2O43439 604 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 ENDOUP21128 410 aaKnown RBP7.21□□□□□ -1.26
PCM1-219ENST00000523540 IKZF1Q13422 519 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 NBPF6Q5VWK0 638 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 TMC3Q7Z5M5 1100 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 ZSWIM9Q86XI8 627 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 FAM178BQ8IXR5 827 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 NBPF4Q96M43 638 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 SUSD2Q9UGT4 822 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 PCDHB12Q9Y5F1 795 aa7.21□□□□□ -1.26
PCM1-219ENST00000523540 WASH4PA8MWX3 477 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 B2RBV5 119 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 GJB6O95452 261 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 TSPAN15O95858 294 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 NMIQ13287 307 aaPredicted RBP7.2□□□□□ -1.26
PCM1-219ENST00000523540 NCAPHQ15003 741 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 DDR2Q16832 855 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 LCNL1Q6ZST4 164 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 UBE2FQ969M7 185 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 TOX2Q96NM4 488 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 DNAJC2Q99543 621 aaKnown RBP7.2□□□□□ -1.26
PCM1-219ENST00000523540 HAUS7Q99871 368 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 HDAC8Q9BY41 377 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 ASCC2Q9H1I8 757 aaPredicted RBP7.2□□□□□ -1.26
PCM1-219ENST00000523540 ATP13A1Q9HD20 1204 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 ST7Q9NRC1 585 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 ZSWIM5Q9P217 1185 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 ZNF451Q9Y4E5 1061 aa7.2□□□□□ -1.26
PCM1-219ENST00000523540 SIGLEC6O43699 453 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 DDAH1O94760 285 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 ESR1P03372 595 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 CD247P20963 164 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 ZP2Q05996 745 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 SERINC3Q13530 473 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 SOGA3Q5TF21 947 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 MRM1Q6IN84 353 aaKnown RBP7.19□□□□□ -1.26
PCM1-219ENST00000523540 ZNF655Q8N720 491 aaPredicted RBP7.19□□□□□ -1.26
PCM1-219ENST00000523540 TRIM55Q9BYV6 548 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 KLHL25Q9H0H3 589 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 GP6Q9HCN6 339 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 FBXL21Q9UKT6 434 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 ZNF281Q9Y2X9 895 aa7.19□□□□□ -1.26
PCM1-219ENST00000523540 PRAMEF1O95521 474 aa7.18□□□□□ -1.26
PCM1-219ENST00000523540 EPHX1P07099 455 aa7.18□□□□□ -1.26
PCM1-219ENST00000523540 TPP2P29144 1249 aaPredicted RBP7.18□□□□□ -1.26
PCM1-219ENST00000523540 RAP1GAPP47736 663 aa7.18□□□□□ -1.26
PCM1-219ENST00000523540 MLANAQ16655 118 aa7.18□□□□□ -1.26
PCM1-219ENST00000523540 RNF111Q6ZNA4 994 aa7.18□□□□□ -1.26
PCM1-219ENST00000523540 KRTAP9-3Q9BYQ3 159 aa7.18□□□□□ -1.26
PCM1-219ENST00000523540 GFOD1Q9NXC2 390 aa7.18□□□□□ -1.26
PCM1-219ENST00000523540 MSRB2Q9Y3D2 182 aa7.18□□□□□ -1.26
PCM1-219ENST00000523540 A0A087WZG4 1122 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 ZNF445P59923 1031 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 RBM10P98175 930 aaKnown RBP7.17□□□□□ -1.26
PCM1-219ENST00000523540 TCEAL1Q15170 157 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 HEATR6Q6AI08 1181 aaKnown RBP7.17□□□□□ -1.26
PCM1-219ENST00000523540 SIAH1Q8IUQ4 282 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 ZNF513Q8N8E2 541 aaPredicted RBP7.17□□□□□ -1.26
PCM1-219ENST00000523540 PMFBP1Q8TBY8 1022 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 ALPK1Q96QP1 1244 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 CHST7Q9NS84 486 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 SIRPGQ9P1W8 387 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 DUSP13Q9UII6 198 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 MINPP1Q9UNW1 487 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 NCANO14594 1321 aa7.17□□□□□ -1.26
PCM1-219ENST00000523540 ANKRD34BA5PLL1 514 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 GDNFP39905 211 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 ZNF143P52747 638 aaPredicted RBP7.16□□□□□ -1.26
PCM1-219ENST00000523540 KCNMB1Q16558 191 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 CLEC16AQ2KHT3 1053 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 LILRA6Q6PI73 481 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 FGD4Q96M96 766 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 CARS2Q9HA77 564 aaKnown RBP7.16□□□□□ -1.26
PCM1-219ENST00000523540 PRDM7Q9NQW5 492 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 WHRNQ9P202 907 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 USP35Q9P2H5 1018 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 CTNND2Q9UQB3 1225 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 FHOD1Q9Y613 1164 aa7.16□□□□□ -1.26
PCM1-219ENST00000523540 PRRG2O14669 202 aa7.15□□□□□ -1.26
PCM1-219ENST00000523540 U2SURPO15042 1029 aaKnown RBP7.15□□□□□ -1.26
PCM1-219ENST00000523540 KRT1P04264 644 aa7.15□□□□□ -1.26
PCM1-219ENST00000523540 LRRC56Q8IYG6 542 aaPredicted RBP7.15□□□□□ -1.26
PCM1-219ENST00000523540 LINC00116Q8NCU8 138 aa7.15□□□□□ -1.26
PCM1-219ENST00000523540 BRF1Q92994 677 aa7.15□□□□□ -1.26
PCM1-219ENST00000523540 TCTN2Q96GX1 697 aa7.15□□□□□ -1.26
PCM1-219ENST00000523540 PPP1R16BQ96T49 567 aa7.15□□□□□ -1.26
PCM1-219ENST00000523540 RAPGEFL1Q9UHV5 662 aa7.15□□□□□ -1.26
PCM1-219ENST00000523540 TMEM59LQ9UK28 342 aa7.15□□□□□ -1.26
PCM1-219ENST00000523540 SUSD5O60279 629 aa7.14□□□□□ -1.27
PCM1-219ENST00000523540 ITGA4P13612 1032 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms