RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 FIBPO43427 364 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 VCAM1P19320 739 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 FBXO18Q8NFZ0 1043 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 TFIP11Q9UBB9 837 aaKnown RBP10.78□□□□□ -0.68
SDCBP-212ENST00000523483 ABT1Q9ULW3 272 aaKnown RBP10.78□□□□□ -0.68
SDCBP-212ENST00000523483 PRPF3O43395 683 aaKnown RBP10.78□□□□□ -0.68
SDCBP-212ENST00000523483 F13A1P00488 732 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 RASGRP4Q8TDF6 673 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 JMJD4Q9H9V9 463 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 ZNF112Q9UJU3 913 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 BTBD18B2RXH4 712 aa10.77□□□□□ -0.68
SDCBP-212ENST00000523483 BRD1O95696 1058 aa10.77□□□□□ -0.68
SDCBP-212ENST00000523483 FUT2Q10981 343 aa10.77□□□□□ -0.68
SDCBP-212ENST00000523483 NR5A1Q13285 461 aa10.77□□□□□ -0.68
SDCBP-212ENST00000523483 PLS1Q14651 629 aa10.77□□□□□ -0.68
SDCBP-212ENST00000523483 CDC37Q16543 378 aaPredicted RBP10.77□□□□□ -0.68
SDCBP-212ENST00000523483 SYDE2Q5VT97 1194 aa10.77□□□□□ -0.68
SDCBP-212ENST00000523483 DIS3L2Q8IYB7 885 aaKnown RBP10.77□□□□□ -0.68
SDCBP-212ENST00000523483 GMCL1P1Q8NEA9 526 aa10.77□□□□□ -0.68
SDCBP-212ENST00000523483 LZTS2Q9BRK4 669 aa10.77□□□□□ -0.68
SDCBP-212ENST00000523483 DDIT3P35638 169 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 PKN1Q16512 942 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 WWC2Q6AWC2 1192 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 EMILIN3Q9NT22 766 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 SCN4AP35499 1836 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 USP14P54578 494 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 DNM1Q05193 864 aaKnown RBP10.77□□□□□ -0.69
SDCBP-212ENST00000523483 ERO1BQ86YB8 467 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 KIAA1683Q9H0B3 1180 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 PRR12Q9ULL5 1215 aa10.77□□□□□ -0.69
SDCBP-212ENST00000523483 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 NOVP48745 357 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 QRICH1Q2TAL8 776 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 OXER1Q8TDS5 423 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 GMCL1Q96IK5 515 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 BRMS1Q9HCU9 246 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 PFKFB3Q16875 520 aaPredicted RBP10.76□□□□□ -0.69
SDCBP-212ENST00000523483 CHURC1Q8WUH1 139 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 GBP4Q96PP9 640 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 SPZ1Q9BXG8 430 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 PEX10O60683 326 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 TYW1BQ6NUM6 668 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 MAP3K14Q99558 947 aa10.76□□□□□ -0.69
SDCBP-212ENST00000523483 FTOQ9C0B1 505 aaKnown RBP eCLIP10.76□□□□□ -0.695e-6■□□□□ 9.5
SDCBP-212ENST00000523483 CST9Q5W186 159 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 LPAR1Q92633 364 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 PGBD1Q96JS3 809 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 PAGR1Q9BTK6 254 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 AFG3L2Q9Y4W6 797 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 ATP6V1DQ9Y5K8 247 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 STK36Q9NRP7 1315 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 SMCO2A6NFE2 343 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 KIF28PB7ZC32 967 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 ZBTB5O15062 677 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 ZNF157P51786 506 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-212ENST00000523483 TREML2Q5T2D2 321 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 SLF1Q9BQI6 1058 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 RBM27Q9P2N5 1060 aaKnown RBP10.75□□□□□ -0.69
SDCBP-212ENST00000523483 CNPY2Q9Y2B0 182 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 WDR90Q96KV7 1748 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 WDR46O15213 610 aaKnown RBP10.75□□□□□ -0.69
SDCBP-212ENST00000523483 ITGBL1O95965 494 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-212ENST00000523483 IRX3P78415 501 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-212ENST00000523483 WDR78Q5VTH9 848 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 JAKMIP3Q5VZ66 844 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 ATG4CQ96DT6 458 aa10.75□□□□□ -0.69
SDCBP-212ENST00000523483 PNMA6FA0A0J9YX94 578 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 GOLGA6L22H0YM25 854 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 BAG4O95429 457 aaKnown RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 MMP1P03956 469 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 FBXO11Q86XK2 927 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 WDR18Q9BV38 432 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 RIOX1Q9H6W3 641 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 RAVER2Q9HCJ3 691 aaKnown RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 BIN2Q9UBW5 565 aaPredicted RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 FAM205CA6NFA0 338 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 KIF3CO14782 793 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 ALAS1P13196 640 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 KRT2P35908 639 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 PPATQ06203 517 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 NFKBIBQ15653 356 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 UBE2SQ16763 222 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 PIK3AP1Q6ZUJ8 805 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 CCDC148Q8NFR7 591 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 WNK4Q96J92 1243 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 SPDYE5A6NIY4 337 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 C19orf81C9J6K1 198 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 PRPF40AO75400 957 aaKnown RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 KIF23Q02241 960 aaPredicted RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 NOM1Q5C9Z4 860 aaKnown RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 NOL9Q5SY16 702 aaKnown RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 PRPF38AQ8NAV1 312 aaKnown RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
SDCBP-212ENST00000523483 SHISA4Q96DD7 197 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
SDCBP-212ENST00000523483 AMNQ9BXJ7 453 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms