RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 RAD21O60216 631 aa23.82■■□□□ 1.4
SQLE-206ENST00000523430 CCDC192P0DO97 292 aa23.82■■□□□ 1.4
SQLE-206ENST00000523430 TYRO3Q06418 890 aa23.82■■□□□ 1.4
SQLE-206ENST00000523430 TTC38Q5R3I4 469 aa23.82■■□□□ 1.4
SQLE-206ENST00000523430 RESP18Q5W5W9 173 aa23.82■■□□□ 1.4
SQLE-206ENST00000523430 MICALL2Q8IY33 904 aa23.82■■□□□ 1.4
SQLE-206ENST00000523430 SPON1Q9HCB6 807 aa23.82■■□□□ 1.4
SQLE-206ENST00000523430 CEP131Q9UPN4 1083 aa23.82■■□□□ 1.4
SQLE-206ENST00000523430 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.81■■□□□ 1.4
SQLE-206ENST00000523430 SLC16A2P36021 539 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 PCDHA6Q9UN73 950 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 HPSEQ9Y251 543 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 PCDHA8Q9Y5H6 950 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 PTPREP23469 700 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 GPATCH4Q5T3I0 446 aaKnown RBP23.81■■□□□ 1.4
SQLE-206ENST00000523430 ADGRF4Q8IZF3 695 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 ZMYND12Q9H0C1 365 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 JMJD4Q9H9V9 463 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 PGAP2Q9UHJ9 254 aa23.81■■□□□ 1.4
SQLE-206ENST00000523430 ZNF174Q15697 407 aa23.8■■□□□ 1.4
SQLE-206ENST00000523430 SPECC1Q5M775 1068 aa23.8■■□□□ 1.4
SQLE-206ENST00000523430 SLFN13Q68D06 897 aa23.8■■□□□ 1.4
SQLE-206ENST00000523430 CTAGE5O15320 804 aa23.79■■□□□ 1.4
SQLE-206ENST00000523430 GALNT17Q6IS24 598 aa23.79■■□□□ 1.4
SQLE-206ENST00000523430 MIGA2Q7L4E1 593 aa23.79■■□□□ 1.4
SQLE-206ENST00000523430 SAMD7Q7Z3H4 446 aa23.79■■□□□ 1.4
SQLE-206ENST00000523430 DCAF4Q8WV16 495 aa23.79■■□□□ 1.4
SQLE-206ENST00000523430 ASTN2O75129 1339 aaPredicted RBP23.79■■□□□ 1.4
SQLE-206ENST00000523430 FAM237AA0A1B0GTK4 181 aa23.79■■□□□ 1.4
SQLE-206ENST00000523430 ZNF202O95125 648 aa23.79■■□□□ 1.4
SQLE-206ENST00000523430 SLC1A4P43007 532 aa23.79■■□□□ 1.4
SQLE-206ENST00000523430 FAM177A1Q8N128 213 aaPredicted RBP23.79■■□□□ 1.4
SQLE-206ENST00000523430 CCDC12Q8WUD4 166 aaPredicted RBP23.79■■□□□ 1.4
SQLE-206ENST00000523430 PPP1R11O60927 126 aaPredicted RBP23.78■■□□□ 1.4
SQLE-206ENST00000523430 TRAPPC10P48553 1259 aa23.78■■□□□ 1.4
SQLE-206ENST00000523430 GMCL1P1Q8NEA9 526 aa23.78■■□□□ 1.4
SQLE-206ENST00000523430 ERCC4Q92889 916 aaPredicted RBP23.78■■□□□ 1.4
SQLE-206ENST00000523430 FHDC1Q9C0D6 1143 aaPredicted RBP23.78■■□□□ 1.4
SQLE-206ENST00000523430 SRPRBQ9Y5M8 271 aaKnown RBP23.78■■□□□ 1.4
SQLE-206ENST00000523430 MORC2Q9Y6X9 1032 aaPredicted RBP23.78■■□□□ 1.4
SQLE-206ENST00000523430 A0A1W2PRG0 241 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 SMCO2A6NFE2 343 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 USP17L10C9JJH3 530 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 NDUFB10O96000 172 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 SYKP43405 635 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 TBC1D10BQ4KMP7 808 aaPredicted RBP23.77■■□□□ 1.4
SQLE-206ENST00000523430 COA7Q96BR5 231 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 NUP88Q99567 741 aaPredicted RBP23.77■■□□□ 1.4
SQLE-206ENST00000523430 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.77■■□□□ 1.4
SQLE-206ENST00000523430 ZBTB21Q9ULJ3 1066 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 CCDC194A0A1B0GVG4 234 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 F5H6K3 240 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 hCG_1984214I3L0E3 225 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 KLRC3Q07444 240 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 RASA3Q14644 834 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 SASS6Q6UVJ0 657 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 ZNF713Q8N859 430 aaPredicted RBP23.77■■□□□ 1.4
SQLE-206ENST00000523430 DPF2Q92785 391 aa23.77■■□□□ 1.4
SQLE-206ENST00000523430 CNOT7Q9UIV1 285 aaKnown RBP23.77■■□□□ 1.4
SQLE-206ENST00000523430 TBC1D12O60347 775 aa23.76■■□□□ 1.39
SQLE-206ENST00000523430 MCM7P33993 719 aa23.76■■□□□ 1.39
SQLE-206ENST00000523430 MMP14P50281 582 aa23.76■■□□□ 1.39
SQLE-206ENST00000523430 SDF4Q9BRK5 362 aa23.76■■□□□ 1.39
SQLE-206ENST00000523430 CSRNP2Q9H175 543 aa23.76■■□□□ 1.39
SQLE-206ENST00000523430 C6orf50Q9HD87 102 aa23.76■■□□□ 1.39
SQLE-206ENST00000523430 PNMA6FA0A0J9YX94 578 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 ESYT2A0FGR8 921 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 BMP15O95972 392 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 ECE1P42892 770 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 TNNI2P48788 182 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 ATP2C1P98194 919 aaPredicted RBP23.75■■□□□ 1.39
SQLE-206ENST00000523430 ANO6Q4KMQ2 910 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 MTMR8Q96EF0 704 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 PTGDRQ13258 359 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 INF2Q27J81 1249 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 KIF4BQ2VIQ3 1234 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 ARHGAP27Q6ZUM4 889 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 ZNF579Q8NAF0 562 aaKnown RBP23.75■■□□□ 1.39
SQLE-206ENST00000523430 GMCL1Q96IK5 515 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 KCNH3Q9ULD8 1083 aa23.75■■□□□ 1.39
SQLE-206ENST00000523430 A0A087WWV3 80 aa23.74■■□□□ 1.39
SQLE-206ENST00000523430 ZBTB5O15062 677 aa23.74■■□□□ 1.39
SQLE-206ENST00000523430 GNA11P29992 359 aa23.74■■□□□ 1.39
SQLE-206ENST00000523430 ACER1Q8TDN7 264 aa23.74■■□□□ 1.39
SQLE-206ENST00000523430 TEPSINQ96N21 525 aa23.74■■□□□ 1.39
SQLE-206ENST00000523430 USP49Q70CQ1 688 aa23.73■■□□□ 1.39
SQLE-206ENST00000523430 HACL1Q9UJ83 578 aa23.73■■□□□ 1.39
SQLE-206ENST00000523430 TNFAIP1Q13829 316 aa23.73■■□□□ 1.39
SQLE-206ENST00000523430 SPICE1Q8N0Z3 855 aa23.73■■□□□ 1.39
SQLE-206ENST00000523430 ANP32BQ92688 251 aaKnown RBP23.73■■□□□ 1.39
SQLE-206ENST00000523430 TIGD1Q96MW7 591 aa23.73■■□□□ 1.39
SQLE-206ENST00000523430 TMEM260Q9NX78 707 aa23.73■■□□□ 1.39
SQLE-206ENST00000523430 ADCY7P51828 1080 aa23.72■■□□□ 1.39
SQLE-206ENST00000523430 PPP1R18Q6NYC8 613 aa23.72■■□□□ 1.39
SQLE-206ENST00000523430 KRT25Q7Z3Z0 450 aa23.72■■□□□ 1.39
SQLE-206ENST00000523430 REXO1Q8N1G1 1221 aaKnown RBP23.72■■□□□ 1.39
SQLE-206ENST00000523430 FAM200AQ8TCP9 573 aa23.72■■□□□ 1.39
SQLE-206ENST00000523430 FERMT2Q96AC1 680 aa23.72■■□□□ 1.39
SQLE-206ENST00000523430 DNAJC25Q9H1X3 360 aa23.72■■□□□ 1.39
SQLE-206ENST00000523430 ARHGEF10LQ9HCE6 1279 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms