RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 ETNK1Q9HBU6 452 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 OGDHLQ9ULD0 1010 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 ZHX2Q9Y6X8 837 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 SCN9AQ15858 1988 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 TAF1P21675 1872 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 CACNA1AO00555 2505 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 EYSQ5T1H1 3165 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 PFASO15067 1338 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 ZNF646O15015 1829 aaPredicted RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 ANKRD18BA2A2Z9 1011 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 FAM86C2PA6NEL3 165 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 TRIM75PA6NK02 468 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 C1QTNF9BB2RNN3 333 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 K7ELQ4 463 aaPredicted RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 CXCL11O14625 94 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 TAF5LO75529 589 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 RIPK4P57078 832 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 FKBP1AP62942 108 aaKnown RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 CHRNDQ07001 517 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 CHAF1AQ13111 956 aaPredicted RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 DDX10Q13206 875 aaKnown RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 TRIM28Q13263 835 aaKnown RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 PABPC4Q13310 644 aaKnown RBP eCLIP4.82□□□□□ -1.64
NPM1-210ENST00000523339 NEUROD2Q15784 382 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 CCDC184Q52MB2 194 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 C9orf50Q5SZB4 431 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 ZSCAN29Q8IWY8 852 aaPredicted RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 BADQ92934 168 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 TEKT1Q969V4 418 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 TIFAQ96CG3 184 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 TEPSINQ96N21 525 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 NECAB3Q96P71 396 aaPredicted RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 ZNF576Q9H609 170 aa4.82□□□□□ -1.64
NPM1-210ENST00000523339 DNAAF2Q9NVR5 837 aaKnown RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 LRRFIP2Q9Y608 721 aaKnown RBP4.82□□□□□ -1.64
NPM1-210ENST00000523339 AOX1Q06278 1338 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.81□□□□□ -1.64
NPM1-210ENST00000523339 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.81□□□□□ -1.64
NPM1-210ENST00000523339 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
NPM1-210ENST00000523339 KBTBD13C9JR72 458 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 APBB1O00213 710 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 IL1R1P14778 569 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 RTP1P59025 263 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 MCCD1P59942 119 aaPredicted RBP4.81□□□□□ -1.64
NPM1-210ENST00000523339 TCP10Q12799 353 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 FAM110CQ1W6H9 321 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 WDR78Q5VTH9 848 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 CCDC174Q6PII3 467 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 CD163Q86VB7 1156 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 Q8N3U1 123 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 TTLL11Q8NHH1 800 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 SOCS4Q8WXH5 440 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 ZCCHC2Q9C0B9 1178 aaKnown RBP4.81□□□□□ -1.64
NPM1-210ENST00000523339 PRDM12Q9H4Q4 367 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 CNNM1Q9NRU3 951 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 BABAM1Q9NWV8 329 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 MKL2Q9ULH7 1088 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 MUC3AQ02505 3323 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 ZSWIM8A7E2V4 1837 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 COL3A1P02461 1466 aaPredicted RBP4.81□□□□□ -1.64
NPM1-210ENST00000523339 LAMB2P55268 1798 aa4.81□□□□□ -1.64
NPM1-210ENST00000523339 PRUNE2Q8WUY3 3088 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 A0A1B0GTH6 734 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 SMIM22K7EJ46 135 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 SNAP23O00161 211 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 COL6A1P12109 1028 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 RAG1P15918 1043 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 FGFR3P22607 806 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 HIBADHP31937 336 aaKnown RBP4.8□□□□□ -1.64
NPM1-210ENST00000523339 RGS2P41220 211 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 CHRNA4P43681 627 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 GCLCP48506 637 aaPredicted RBP4.8□□□□□ -1.64
NPM1-210ENST00000523339 IRX3P78415 501 aaPredicted RBP4.8□□□□□ -1.64
NPM1-210ENST00000523339 IFIT5Q13325 482 aaKnown RBP4.8□□□□□ -1.64
NPM1-210ENST00000523339 KRT24Q2M2I5 525 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 AKNAD1Q5T1N1 836 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 MFSD14CQ5VZR4 134 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 TMEM214Q6NUQ4 689 aaKnown RBP4.8□□□□□ -1.64
NPM1-210ENST00000523339 UBE3BQ7Z3V4 1068 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 FAM83AQ86UY5 434 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 BANK1Q8NDB2 785 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 TRIB2Q92519 343 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 EPHX3Q9H6B9 360 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 MSRAQ9UJ68 235 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 SLC45A1Q9Y2W3 748 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 USP3Q9Y6I4 520 aa4.8□□□□□ -1.64
NPM1-210ENST00000523339 BDP1A6H8Y1 2624 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 MAST3O60307 1309 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 MYBBP1AQ9BQG0 1328 aaKnown RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 PIEZO1Q92508 2521 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 A0A0G2JLL6 359 aaPredicted RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 NEURL1BA8MQ27 555 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 DNM1LO00429 736 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 MSCO60682 206 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 GLRX3O76003 335 aaKnown RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 HOXB7P09629 217 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 EPXP11678 715 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 BMP4P12644 408 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 PPP2R1AP30153 589 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 CCND3P30281 292 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms