RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 GMCL1Q96IK5 515 aa14.33□□□□□ -0.11
PABPC1-219ENST00000522387 GINM1Q9NU53 330 aa14.33□□□□□ -0.11
PABPC1-219ENST00000522387 RBM28Q9NW13 759 aaKnown RBP14.33□□□□□ -0.11
PABPC1-219ENST00000522387 ORC3Q9UBD5 711 aaPredicted RBP14.33□□□□□ -0.11
PABPC1-219ENST00000522387 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.33□□□□□ -0.11
PABPC1-219ENST00000522387 PRKCSHP14314 528 aaPredicted RBP14.33□□□□□ -0.12
PABPC1-219ENST00000522387 SSRP1Q08945 709 aaKnown RBP14.33□□□□□ -0.12
PABPC1-219ENST00000522387 ASPRV1Q53RT3 343 aa14.33□□□□□ -0.12
PABPC1-219ENST00000522387 CCDC174Q6PII3 467 aa14.33□□□□□ -0.12
PABPC1-219ENST00000522387 CPXCR1Q8N123 301 aa14.33□□□□□ -0.12
PABPC1-219ENST00000522387 FAM184AQ8NB25 1140 aa14.33□□□□□ -0.12
PABPC1-219ENST00000522387 DCAF4Q8WV16 495 aa14.33□□□□□ -0.12
PABPC1-219ENST00000522387 CCL15-CCL14A0A0B4J2E2 113 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 C19orf81C9J6K1 198 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 APLP1P51693 650 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 FUT2Q10981 343 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 SNAPC2Q13487 334 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 CCL15Q16663 113 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 USH1GQ495M9 461 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 GPATCH4Q5T3I0 446 aaKnown RBP14.32□□□□□ -0.12
PABPC1-219ENST00000522387 CPLX2Q6PUV4 134 aaKnown RBP14.32□□□□□ -0.12
PABPC1-219ENST00000522387 RASAL3Q86YV0 1011 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 JMJD4Q9H9V9 463 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 A0A0G2JLL6 359 aaPredicted RBP14.32□□□□□ -0.12
PABPC1-219ENST00000522387 DDX11L8A8MPP1 907 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 CYP2C8P10632 490 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 IFNAR1P17181 557 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 AKAP17AQ02040 695 aaKnown RBP14.32□□□□□ -0.12
PABPC1-219ENST00000522387 PRRT2Q7Z6L0 340 aaPredicted RBP14.32□□□□□ -0.12
PABPC1-219ENST00000522387 LPAR1Q92633 364 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 MS4A4AQ96JQ5 239 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 PRR12Q9ULL5 1215 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
PABPC1-219ENST00000522387 PTPRFP10586 1907 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 WDR46O15213 610 aaKnown RBP14.31□□□□□ -0.12
PABPC1-219ENST00000522387 AOC2O75106 756 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 FOXD4L6Q3SYB3 417 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-219ENST00000522387 FOXD4L3Q6VB84 417 aaPredicted RBP14.31□□□□□ -0.12
PABPC1-219ENST00000522387 HEATR3Q7Z4Q2 680 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 TRIM22Q8IYM9 498 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 BRI3BPQ8WY22 251 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 CXCL11O14625 94 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 SYDE2Q5VT97 1194 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 COA7Q96BR5 231 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 ATG4CQ96DT6 458 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 PTPN18Q99952 460 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 KCNH4Q9UQ05 1017 aa14.31□□□□□ -0.12
PABPC1-219ENST00000522387 CDKL5O76039 1030 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 MOGSQ13724 837 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 HOMER2Q9NSB8 354 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 KCNJ14Q9UNX9 436 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 VPS37CA5D8V6 355 aaPredicted RBP14.3□□□□□ -0.12
PABPC1-219ENST00000522387 BTBD19C9JJ37 291 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 FMNL1O95466 1100 aaPredicted RBP14.3□□□□□ -0.12
PABPC1-219ENST00000522387 GNAQP50148 359 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 GTF2A2P52657 109 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 RCAN1P53805 252 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 PLS1Q14651 629 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 PKN1Q16512 942 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 CDC37Q16543 378 aaPredicted RBP14.3□□□□□ -0.12
PABPC1-219ENST00000522387 DEFB115Q30KQ5 88 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 LARP1BQ659C4 914 aaKnown RBP14.3□□□□□ -0.12
PABPC1-219ENST00000522387 RRP36Q96EU6 259 aaKnown RBP14.3□□□□□ -0.12
PABPC1-219ENST00000522387 CHAMP1Q96JM3 812 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 MAP3K14Q99558 947 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 SLF1Q9BQI6 1058 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 ALG1Q9BT22 464 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 PANK2Q9BZ23 570 aa14.3□□□□□ -0.12
PABPC1-219ENST00000522387 SEC63Q9UGP8 760 aaKnown RBP14.3□□□□□ -0.12
PABPC1-219ENST00000522387 FAM155AB1AL88 458 aaPredicted RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 PPP1R11O60927 126 aaPredicted RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 IRX3P78415 501 aaPredicted RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 SH3D19Q5HYK7 790 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 SMARCC2Q8TAQ2 1214 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 INTS4Q96HW7 963 aaKnown RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 P2RX7Q99572 595 aaKnown RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 PAGR1Q9BTK6 254 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 PDHXO00330 501 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 ZBTB48P10074 688 aaPredicted RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 CETPP11597 493 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 QRICH1Q2TAL8 776 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 GPAT2Q6NUI2 795 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 CATSPERGQ6ZRH7 1159 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 PRPF38AQ8NAV1 312 aaKnown RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 CHURC1Q8WUH1 139 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 SHISA4Q96DD7 197 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 AGBL1Q96MI9 1066 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 ASCC2Q9H1I8 757 aaPredicted RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 RIOX1Q9H6W3 641 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 RAVER2Q9HCJ3 691 aaKnown RBP14.29□□□□□ -0.12
PABPC1-219ENST00000522387 CREBZFQ9NS37 354 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 FEM1BQ9UK73 627 aa14.29□□□□□ -0.12
PABPC1-219ENST00000522387 COG2Q14746 738 aa14.28□□□□□ -0.12
PABPC1-219ENST00000522387 TYW1BQ6NUM6 668 aa14.28□□□□□ -0.12
PABPC1-219ENST00000522387 FASTKD5Q7L8L6 764 aaKnown RBP14.28□□□□□ -0.12
PABPC1-219ENST00000522387 FERMT3Q86UX7 667 aa14.28□□□□□ -0.12
PABPC1-219ENST00000522387 PROCA1Q8NCQ7 364 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms