RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ERO1BQ86YB8 467 aa15.12■□□□□ 0.01
CPNE3-205ENST00000522240 FAM177A1Q8N128 213 aaPredicted RBP15.12■□□□□ 0.01
CPNE3-205ENST00000522240 CMTR1Q8N1G2 835 aaKnown RBP15.12■□□□□ 0.01
CPNE3-205ENST00000522240 ZFP91Q96JP5 570 aaPredicted RBP15.12■□□□□ 0.01
CPNE3-205ENST00000522240 ALG1Q9BT22 464 aa15.12■□□□□ 0.01
CPNE3-205ENST00000522240 hCG_1984214I3L0E3 225 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 CYTH3O43739 400 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 ITGBL1O95965 494 aaPredicted RBP15.11■□□□□ 0.01
CPNE3-205ENST00000522240 BACE1P56817 501 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 PPATQ06203 517 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 MTMR2Q13614 643 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 SLC35G1Q2M3R5 365 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 SH3D19Q5HYK7 790 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 BTNL9Q6UXG8 535 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 KCTD1Q719H9 257 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 ZNF713Q8N859 430 aaPredicted RBP15.11■□□□□ 0.01
CPNE3-205ENST00000522240 C8orf76Q96K31 380 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 GBA2Q9HCG7 927 aaPredicted RBP15.11■□□□□ 0.01
CPNE3-205ENST00000522240 GPCPD1Q9NPB8 672 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 AFG3L2Q9Y4W6 797 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 ZHX2Q9Y6X8 837 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 PASKQ96RG2 1323 aa15.11■□□□□ 0.01
CPNE3-205ENST00000522240 RAD21O60216 631 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 DTNBO60941 627 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 SCG2P13521 617 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 XBP1P17861 261 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 STAT2P52630 851 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 SPP2Q13103 211 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 PPIL2Q13356 520 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 ZYXQ15942 572 aaKnown RBP15.1■□□□□ 0.01
CPNE3-205ENST00000522240 PKN1Q16512 942 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 PFKFB3Q16875 520 aaPredicted RBP15.1■□□□□ 0.01
CPNE3-205ENST00000522240 KIAA1755Q5JYT7 1200 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 MOB2Q70IA6 237 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 FAM160B2Q86V87 743 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 CCDC82Q8N4S0 544 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 MTMR8Q96EF0 704 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 RRP36Q96EU6 259 aaKnown RBP15.1■□□□□ 0.01
CPNE3-205ENST00000522240 ZNF408Q9H9D4 720 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 MTMR6Q9Y217 621 aa15.1■□□□□ 0.01
CPNE3-205ENST00000522240 PARP14Q460N5 1801 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 H3BQV1 296 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 PPFIA3O75145 1194 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 CELF2O95319 508 aaKnown RBP15.09■□□□□ 0.01
CPNE3-205ENST00000522240 ZSCAN22P10073 491 aaPredicted RBP15.09■□□□□ 0.01
CPNE3-205ENST00000522240 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
CPNE3-205ENST00000522240 VCAM1P19320 739 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 PKP1Q13835 747 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 FAM83BQ5T0W9 1011 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 SYDE2Q5VT97 1194 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 SPICE1Q8N0Z3 855 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 C2orf69Q8N8R5 385 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 FBXO18Q8NFZ0 1043 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 CLMNQ96JQ2 1002 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 NUP88Q99567 741 aaPredicted RBP15.09■□□□□ 0.01
CPNE3-205ENST00000522240 ELP3Q9H9T3 547 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 SEC63Q9UGP8 760 aaKnown RBP15.09■□□□□ 0.01
CPNE3-205ENST00000522240 FEM1BQ9UK73 627 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 ISY1Q9ULR0 285 aaKnown RBP15.09■□□□□ 0.01
CPNE3-205ENST00000522240 KCNH4Q9UQ05 1017 aa15.09■□□□□ 0.01
CPNE3-205ENST00000522240 V9GY48 417 aaPredicted RBP15.09■□□□□ 0.01
CPNE3-205ENST00000522240 VPS37CA5D8V6 355 aaPredicted RBP15.08■□□□□ 0
CPNE3-205ENST00000522240 TRIM75PA6NK02 468 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 TMEM232C9JQI7 657 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 CXCL11O14625 94 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 FMR1Q06787 632 aaKnown RBP eCLIP15.08■□□□□ 0
CPNE3-205ENST00000522240 TRIM29Q14134 588 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 TTBK2Q6IQ55 1244 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 ADGRF4Q8IZF3 695 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 CHURC1Q8WUH1 139 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 AIFM3Q96NN9 605 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 UBA5Q9GZZ9 404 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 TSPYL2Q9H2G4 693 aaPredicted RBP15.08■□□□□ 0
CPNE3-205ENST00000522240 PRDM10Q9NQV6 1147 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 SH3GLB2Q9NR46 395 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 EMILIN3Q9NT22 766 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 TMOD4Q9NZQ9 345 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 ZDHHC9Q9Y397 364 aa15.08■□□□□ 0
CPNE3-205ENST00000522240 TMEM88BA6NKF7 163 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 UBE2Q2LH0YL09 131 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 F13A1P00488 732 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 HMGCS2P54868 508 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 IKQ13123 557 aaPredicted RBP15.07■□□□□ 0
CPNE3-205ENST00000522240 PPP1R18Q6NYC8 613 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 CCDC148Q8NFR7 591 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 OTUD5Q96G74 571 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 CPVLQ9H3G5 476 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 JMJD4Q9H9V9 463 aa15.07■□□□□ 0
CPNE3-205ENST00000522240 RYDENQ9NUL5 291 aaKnown RBP15.07■□□□□ 0
CPNE3-205ENST00000522240 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
CPNE3-205ENST00000522240 A0A0G2JLL6 359 aaPredicted RBP15.06■□□□□ 0
CPNE3-205ENST00000522240 PNMA6FA0A0J9YX94 578 aa15.06■□□□□ 0
CPNE3-205ENST00000522240 hCG_1642624A0A1W2PR95 340 aa15.06■□□□□ 0
CPNE3-205ENST00000522240 ZBTB5O15062 677 aa15.06■□□□□ 0
CPNE3-205ENST00000522240 SLC16A2P36021 539 aa15.06■□□□□ 0
CPNE3-205ENST00000522240 KRT40Q6A162 431 aa15.06■□□□□ 0
CPNE3-205ENST00000522240 WWC2Q6AWC2 1192 aa15.06■□□□□ 0
CPNE3-205ENST00000522240 PRRT2Q7Z6L0 340 aaPredicted RBP15.06■□□□□ 0
CPNE3-205ENST00000522240 HOMER1Q86YM7 354 aa15.06■□□□□ 0
CPNE3-205ENST00000522240 PROCA1Q8NCQ7 364 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms