RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 GOLGA5Q8TBA6 731 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 ENOX1Q8TC92 643 aaKnown RBP15.32■□□□□ 0.04
SYNPO-205ENST00000522122 NLRC4Q9NPP4 1024 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 UTP11Q9Y3A2 253 aaKnown RBP15.32■□□□□ 0.04
SYNPO-205ENST00000522122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
SYNPO-205ENST00000522122 SMCO2A6NFE2 343 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 ADD2P35612 726 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 RPS6KA1Q15418 735 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 TGFBRAP1Q8WUH2 860 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 CDC23Q9UJX2 597 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 CHMP2AO43633 222 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 NCAPH2Q6IBW4 605 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 HAUS4Q9H6D7 363 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 TBC1D7Q9P0N9 293 aa15.32■□□□□ 0.04
SYNPO-205ENST00000522122 SIGLEC1Q9BZZ2 1709 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 KLHL7Q8IXQ5 586 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
SYNPO-205ENST00000522122 GTPBP6O43824 516 aaPredicted RBP15.31■□□□□ 0.04
SYNPO-205ENST00000522122 BCAMP50895 628 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 EXOSC10Q01780 885 aaKnown RBP15.31■□□□□ 0.04
SYNPO-205ENST00000522122 TRIM58Q8NG06 486 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 PUS7LQ9H0K6 701 aaKnown RBP15.31■□□□□ 0.04
SYNPO-205ENST00000522122 VIMP08670 466 aaKnown RBP15.31■□□□□ 0.04
SYNPO-205ENST00000522122 ATP1A3P13637 1013 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 MXRA7P84157 204 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 KIFAP3Q92845 792 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 NKIRAS1Q9NYS0 192 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 STK24Q9Y6E0 443 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 BACH1O14867 736 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 SCG2P13521 617 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 PHKA1P46020 1223 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 STOX1Q6ZVD7 989 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 FAM212AQ96EL1 285 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 SH2D4AQ9H788 454 aa15.31■□□□□ 0.04
SYNPO-205ENST00000522122 MMP1P03956 469 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 RAD51AP2Q09MP3 1159 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 PANX2Q96RD6 677 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 TRIM31Q9BZY9 425 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 PKD2L1Q9P0L9 805 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 MYO1AQ9UBC5 1043 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 INPP5BP32019 993 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 SETDB1Q15047 1291 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 MB21D2Q8IYB1 491 aaPredicted RBP15.3■□□□□ 0.04
SYNPO-205ENST00000522122 SREK1Q8WXA9 508 aaKnown RBP15.3■□□□□ 0.04
SYNPO-205ENST00000522122 PARP3Q9Y6F1 533 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 ARHGEF35A5YM69 484 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 GYG1P46976 350 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 PTGDRQ13258 359 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 NAA30Q147X3 362 aaPredicted RBP15.3■□□□□ 0.04
SYNPO-205ENST00000522122 ARMCX5Q6P1M9 558 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 UBL4BQ8N7F7 174 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 GDAP1L1Q96MZ0 367 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 NT5C3AQ9H0P0 336 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 PNMA1Q8ND90 353 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 FAM71BQ8TC56 605 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 FNBP1Q96RU3 617 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 CSRNP2Q9H175 543 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 GREM2Q9H772 168 aa15.3■□□□□ 0.04
SYNPO-205ENST00000522122 AP5Z1O43299 807 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 ATP5DP30049 168 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 SMTNP53814 917 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 BIRC3Q13489 604 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 CCDC24Q8N4L8 307 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 MSANTD4Q8NCY6 345 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 KRT5P13647 590 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
SYNPO-205ENST00000522122 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
SYNPO-205ENST00000522122 RBL2Q08999 1139 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 LONRF2Q1L5Z9 754 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 WDR44Q5JSH3 913 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 PEX26Q7Z412 305 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 DAAM2Q86T65 1068 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 GSDMAQ96QA5 445 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 RABEP2Q9H5N1 569 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 SP4Q02446 784 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 INF2Q27J81 1249 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 RABL6Q3YEC7 729 aaPredicted RBP15.29■□□□□ 0.04
SYNPO-205ENST00000522122 CTTNBP2NLQ9P2B4 639 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 EPN1Q9Y6I3 576 aaPredicted RBP15.29■□□□□ 0.04
SYNPO-205ENST00000522122 SLIT1O75093 1534 aa15.29■□□□□ 0.04
SYNPO-205ENST00000522122 SYMPKQ92797 1274 aaKnown RBP15.28■□□□□ 0.04
SYNPO-205ENST00000522122 MED4Q9NPJ6 270 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 B4DLN1 442 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 CROCCP2Q86T23 111 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 POTEDQ86YR6 584 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 SYCE1Q8N0S2 351 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 SMC6Q96SB8 1091 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 BIN2Q9UBW5 565 aaPredicted RBP15.28■□□□□ 0.04
SYNPO-205ENST00000522122 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 TBC1D22AQ8WUA7 517 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 GPHNQ9NQX3 736 aaPredicted RBP15.28■□□□□ 0.04
SYNPO-205ENST00000522122 MAP3K15Q6ZN16 1313 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 CCDC169A6NNP5 214 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 UBAP1LF5GYI3 381 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 GNA14O95837 355 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 NYAP1Q6ZVC0 841 aa15.28■□□□□ 0.04
SYNPO-205ENST00000522122 PARD6BQ9BYG5 372 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms