RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 DPP9Q86TI2 863 aa11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 LENG1Q96BZ8 264 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 VWCEQ96DN2 955 aa11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 MOV10L1Q9BXT6 1211 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 XPNPEP3Q9NQH7 507 aa11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 GNL3LQ9NVN8 582 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 PI4KBQ9UBF8 816 aa11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 ZBTB21Q9ULJ3 1066 aa11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 IVNS1ABPQ9Y6Y0 642 aa11.04□□□□□ -0.64
TRAPPC9-212ENST00000521944 ADAMTS4O75173 837 aa11.03□□□□□ -0.64
TRAPPC9-212ENST00000521944 EXOSC9Q06265 439 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-212ENST00000521944 SKIV2LQ15477 1246 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-212ENST00000521944 ATP2B3Q16720 1220 aa11.03□□□□□ -0.64
TRAPPC9-212ENST00000521944 ZGPATQ8N5A5 531 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-212ENST00000521944 DCHS1Q96JQ0 3298 aa11.03□□□□□ -0.64
TRAPPC9-212ENST00000521944 DCDC2CA8MYV0 355 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 STRNO43815 780 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 VCAM1P19320 739 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 ZYXQ15942 572 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 CCDC27Q2M243 656 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 ANKK1Q8NFD2 765 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 SH3RF3Q8TEJ3 882 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 TATDN2Q93075 761 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 NSUN4Q96CB9 384 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 MAML3Q96JK9 1138 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 USP44Q9H0E7 712 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 COG5Q9UP83 839 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 RIF1Q5UIP0 2472 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 PDS5AQ29RF7 1337 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 ZNF236Q9UL36 1845 aa11.02□□□□□ -0.65
TRAPPC9-212ENST00000521944 MAP4K4O95819 1239 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 ZNF865P0CJ78 1059 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 RARBP10826 455 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 ERCC3P19447 782 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 ACLYP53396 1101 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 TBC1D9Q6ZT07 1266 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 RNF180Q86T96 592 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 KLHDC9Q8NEP7 349 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 WNT2BQ93097 391 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 GINM1Q9NU53 330 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 SEPT9Q9UHD8 586 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 IL16Q14005 1332 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 ZNF521Q96K83 1311 aa11.01□□□□□ -0.65
TRAPPC9-212ENST00000521944 MYADML2A6NDP7 307 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 ARHGEF15O94989 841 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 GH2P01242 217 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 CYP2C18P33260 490 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 TIMM10P62072 90 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 PPP2R2DQ66LE6 453 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 PSRC1Q6PGN9 363 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-212ENST00000521944 PI16Q6UXB8 463 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 FOXP4Q8IVH2 680 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-212ENST00000521944 TEX11Q8IYF3 940 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 HLA-CQ95604 372 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 KCTD12Q96CX2 325 aaKnown RBP11□□□□□ -0.65
TRAPPC9-212ENST00000521944 TSEN34Q9BSV6 310 aaKnown RBP11□□□□□ -0.65
TRAPPC9-212ENST00000521944 PPP1R12CQ9BZL4 782 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 SIL1Q9H173 461 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 DHX36Q9H2U1 1008 aaKnown RBP11□□□□□ -0.65
TRAPPC9-212ENST00000521944 IL23AQ9NPF7 189 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 STARD7Q9NQZ5 370 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 PALD1Q9ULE6 856 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-212ENST00000521944 UMODL1Q5DID0 1318 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 MYO15AQ9UKN7 3530 aa11□□□□□ -0.65
TRAPPC9-212ENST00000521944 CACNA1GO43497 2377 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 KCNA10Q16322 511 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 SPTY2D1Q68D10 685 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 ERICH6Q7L0X2 663 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 OTOP2Q7RTS6 562 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 FAM126BQ8IXS8 530 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 TMEM199Q8N511 208 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 SPATC1LQ9H0A9 340 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 KIAA1683Q9H0B3 1180 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 RPAP3Q9H6T3 665 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 CERS4Q9HA82 394 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 CEP126Q9P2H0 1117 aa10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 ZNFX1Q9P2E3 1918 aaKnown RBP10.99□□□□□ -0.65
TRAPPC9-212ENST00000521944 GPR37O15354 613 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 LPXNO60711 386 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 CIAO1O76071 339 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 CD4P01730 458 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 FGBP02675 491 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 CCDC174Q6PII3 467 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 SPRED2Q7Z698 418 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 MAPKAPK5Q8IW41 473 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 ABRAQ8N0Z2 381 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 TGFBRAP1Q8WUH2 860 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 UIMC1Q96RL1 719 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 HMG20BQ9P0W2 317 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 NRBP1Q9UHY1 535 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 PCDHA11Q9Y5I1 949 aa10.98□□□□□ -0.65
TRAPPC9-212ENST00000521944 SYNRGQ9UMZ2 1314 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms