RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 MYL10Q9BUA6 226 aa25.53■■□□□ 1.68
PTP4A3-204ENST00000521578 RBSNQ9H1K0 784 aa25.53■■□□□ 1.68
PTP4A3-204ENST00000521578 KIF3AQ9Y496 699 aa25.53■■□□□ 1.68
PTP4A3-204ENST00000521578 CATIPQ7Z7H3 387 aa25.52■■□□□ 1.68
PTP4A3-204ENST00000521578 ZNF654Q8IZM8 581 aa25.52■■□□□ 1.68
PTP4A3-204ENST00000521578 FAM184AQ8NB25 1140 aa25.52■■□□□ 1.68
PTP4A3-204ENST00000521578 NAP1L2Q9ULW6 460 aaPredicted RBP25.52■■□□□ 1.68
PTP4A3-204ENST00000521578 SLC12A7Q9Y666 1083 aa25.52■■□□□ 1.68
PTP4A3-204ENST00000521578 LOC285556D6RIA3 1793 aa25.52■■□□□ 1.68
PTP4A3-204ENST00000521578 PTPDC1A2A3K4 754 aa25.51■■□□□ 1.68
PTP4A3-204ENST00000521578 FAM83BQ5T0W9 1011 aa25.51■■□□□ 1.68
PTP4A3-204ENST00000521578 GPAT2Q6NUI2 795 aa25.51■■□□□ 1.68
PTP4A3-204ENST00000521578 FERMT3Q86UX7 667 aa25.51■■□□□ 1.68
PTP4A3-204ENST00000521578 ZSCAN16Q9H4T2 348 aaPredicted RBP25.51■■□□□ 1.68
PTP4A3-204ENST00000521578 KLF18A0A0U1RQI7 1052 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 TESPA1A2RU30 521 aaPredicted RBP25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 BTBD19C9JJ37 291 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 LETM1O95202 739 aaPredicted RBP25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 PDHBP11177 359 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 SLC1A4P43007 532 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 SREBF2Q12772 1141 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 RESTQ13127 1097 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 CCDC183Q5T5S1 534 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 NUP133Q8WUM0 1156 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 RPAP3Q9H6T3 665 aaPredicted RBP25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 AGTPBP1Q9UPW5 1226 aa25.51■■□□□ 1.67
PTP4A3-204ENST00000521578 WDR46O15213 610 aaKnown RBP25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 RXRAP19793 462 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 INHBEP58166 350 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 TROAPQ12815 778 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 CCDC96Q2M329 555 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 APOA5Q6Q788 366 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 KCTD1Q719H9 257 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 FAM43AQ8N2R8 423 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 DDX11Q96FC9 970 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 GMCL1Q96IK5 515 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 TANGO6Q9C0B7 1094 aa25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 SCAND2PQ9GZW5 306 aaPredicted RBP25.5■■□□□ 1.67
PTP4A3-204ENST00000521578 IGF2BP3O00425 579 aaKnown RBP eCLIP25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 CCT2P78371 535 aaKnown RBP25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 SYNE3Q6ZMZ3 975 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 MICU3Q86XE3 530 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 DCAF4Q8WV16 495 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 PPP1R9BQ96SB3 815 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 FRMPD2Q68DX3 1309 aaPredicted RBP25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 H3BQV1 296 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 BMP3P12645 472 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 MAP2K2P36507 400 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 TM4SF4P48230 202 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 IFFO2Q5TF58 517 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 CCDC144CPQ8IYA2 1237 aa25.49■■□□□ 1.67
PTP4A3-204ENST00000521578 GOLGA8HP0CJ92 632 aa25.48■■□□□ 1.67
PTP4A3-204ENST00000521578 SNHG28P0DPA3 235 aa25.48■■□□□ 1.67
PTP4A3-204ENST00000521578 SAMD1Q6SPF0 538 aaPredicted RBP25.48■■□□□ 1.67
PTP4A3-204ENST00000521578 IFNL1Q8IU54 200 aa25.48■■□□□ 1.67
PTP4A3-204ENST00000521578 PDHXO00330 501 aa25.47■■□□□ 1.67
PTP4A3-204ENST00000521578 DDAH1O94760 285 aa25.47■■□□□ 1.67
PTP4A3-204ENST00000521578 CCDC173Q0VFZ6 552 aa25.47■■□□□ 1.67
PTP4A3-204ENST00000521578 ANKRD23Q86SG2 305 aa25.47■■□□□ 1.67
PTP4A3-204ENST00000521578 NCOA5Q9HCD5 579 aaKnown RBP25.47■■□□□ 1.67
PTP4A3-204ENST00000521578 GPCPD1Q9NPB8 672 aa25.47■■□□□ 1.67
PTP4A3-204ENST00000521578 GOLGA8BA8MQT2 603 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L15C9J2P7 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L13C9JLJ4 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L11C9JVI0 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L18D6R9N7 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L22D6RA61 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L17D6RBQ6 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L19D6RCP7 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L20D6RJB6 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 ZBTB43O43298 467 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 PARP1P09874 1014 aaKnown RBP25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 ZNF543Q08ER8 600 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 USP17L24Q0WX57 530 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 FAM173BQ6P4H8 233 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 CATSPERGQ6ZRH7 1159 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 DNAJC5GQ8N7S2 189 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 TSPY26PQ9H489 355 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 FBXO28Q9NVF7 368 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 TMEM232C9JQI7 657 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 DHX16O60231 1041 aaKnown RBP25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 HOXA7P31268 230 aaPredicted RBP25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 TTBK2Q6IQ55 1244 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 ANP32BQ92688 251 aaKnown RBP25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 HPS5Q9UPZ3 1129 aa25.46■■□□□ 1.67
PTP4A3-204ENST00000521578 TCHHQ07283 1943 aa25.45■■□□□ 1.66
PTP4A3-204ENST00000521578 FLOT1O75955 427 aa25.45■■□□□ 1.66
PTP4A3-204ENST00000521578 IKQ13123 557 aaPredicted RBP25.45■■□□□ 1.66
PTP4A3-204ENST00000521578 PABPC4Q13310 644 aaKnown RBP eCLIP25.45■■□□□ 1.663e-15■■□□□ 14.2
PTP4A3-204ENST00000521578 GRM4Q14833 912 aa25.45■■□□□ 1.66
PTP4A3-204ENST00000521578 STAG2Q8N3U4 1231 aa25.45■■□□□ 1.66
PTP4A3-204ENST00000521578 MAD2L2Q9UI95 211 aa25.45■■□□□ 1.66
PTP4A3-204ENST00000521578 CALM1P0DP23 149 aa25.44■■□□□ 1.66
PTP4A3-204ENST00000521578 CALM2P0DP24 149 aa25.44■■□□□ 1.66
PTP4A3-204ENST00000521578 CALM3P0DP25 149 aa25.44■■□□□ 1.66
PTP4A3-204ENST00000521578 IRX3P78415 501 aaPredicted RBP25.44■■□□□ 1.66
PTP4A3-204ENST00000521578 OTUD7BQ6GQQ9 843 aa25.44■■□□□ 1.66
PTP4A3-204ENST00000521578 REM2Q8IYK8 340 aaPredicted RBP25.44■■□□□ 1.66
PTP4A3-204ENST00000521578 CTCFLQ8NI51 663 aaPredicted RBP25.44■■□□□ 1.66
PTP4A3-204ENST00000521578 ASCC2Q9H1I8 757 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms