RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 SPATC1LQ9H0A9 340 aa16.12■□□□□ 0.17
CTNNA1-226ENST00000521368 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
CTNNA1-226ENST00000521368 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
CTNNA1-226ENST00000521368 ZBED4O75132 1171 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 DDAH1O94760 285 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 SEC24BO95487 1268 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 PARP1P09874 1014 aaKnown RBP16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 HOXD10P28358 340 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 CTGFP29279 349 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 OAZ1P54368 228 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 TROAPQ12815 778 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 CATIPQ7Z7H3 387 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 FBXL16Q8N461 479 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 SENP2Q9HC62 589 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 ZNF214Q9UL59 606 aaPredicted RBP16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 TRIM17Q9Y577 477 aa16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
CTNNA1-226ENST00000521368 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 PEX10O60683 326 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 FMNL1O95466 1100 aaPredicted RBP16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 SLC25A27O95847 323 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 RPS6KB1P23443 525 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 COPB2P35606 906 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 RIOX2Q8IUF8 465 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 ZNF654Q8IZM8 581 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 CHMP4CQ96CF2 233 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 PORCNQ9H237 461 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 GPHNQ9NQX3 736 aaPredicted RBP16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
CTNNA1-226ENST00000521368 PALM3A6NDB9 673 aaPredicted RBP16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 CCDC69A6NI79 296 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 CALM1P0DP23 149 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 CALM2P0DP24 149 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 CALM3P0DP25 149 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 STAT3P40763 770 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 GRM4Q14833 912 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 COL13A1Q5TAT6 717 aaPredicted RBP16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 TTBK2Q6IQ55 1244 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 NFXL1Q6ZNB6 911 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 COA7Q96BR5 231 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 MOV10L1Q9BXT6 1211 aaKnown RBP16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 TEX13BQ9BXU2 312 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 AGXT2Q9BYV1 514 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 RANBP17Q9H2T7 1088 aaKnown RBP16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 MROH8Q9H579 483 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 SRRDQ9UH36 339 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 CTDP1Q9Y5B0 961 aaPredicted RBP16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 CYP46A1Q9Y6A2 500 aa16.09■□□□□ 0.17
CTNNA1-226ENST00000521368 ZNF236Q9UL36 1845 aa16.08■□□□□ 0.17
CTNNA1-226ENST00000521368 GOLGA8HP0CJ92 632 aa16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 SLC16A2P36021 539 aa16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 PLS1Q14651 629 aa16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 FBXO46Q6PJ61 603 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 GPR142Q7Z601 462 aa16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 TCEANC2Q96MN5 208 aa16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 PNMA2Q9UL42 364 aa16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 SLC12A7Q9Y666 1083 aa16.08■□□□□ 0.16
CTNNA1-226ENST00000521368 STRNO43815 780 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 CPA1P15085 419 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 ERCC3P19447 782 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 KIF5BP33176 963 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 RCAN1P53805 252 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 FGD1P98174 961 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 SNRNP48Q6IEG0 339 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 PLEKHH3Q7Z736 793 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 SOCS4Q8WXH5 440 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 PTPN22Q9Y2R2 807 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 IVNS1ABPQ9Y6Y0 642 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 ZNF536O15090 1300 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 PLXNB2O15031 1838 aa16.07■□□□□ 0.16
CTNNA1-226ENST00000521368 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 ICAM1P05362 532 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 PRKCZQ05513 592 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 IRF5Q13568 498 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 TKFCQ3LXA3 575 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 APOA5Q6Q788 366 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 SYNE3Q6ZMZ3 975 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 Q6ZUG5 572 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 ABRAQ8N0Z2 381 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 STAG2Q8N3U4 1231 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 NUP133Q8WUM0 1156 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 MCOLN1Q9GZU1 580 aa16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 RAVER2Q9HCJ3 691 aaKnown RBP16.06■□□□□ 0.16
CTNNA1-226ENST00000521368 HTTP42858 3142 aa16.05■□□□□ 0.16
CTNNA1-226ENST00000521368 SLC15A5A6NIM6 579 aa16.05■□□□□ 0.16
CTNNA1-226ENST00000521368 PTPREP23469 700 aa16.05■□□□□ 0.16
CTNNA1-226ENST00000521368 SMARCA1P28370 1054 aa16.05■□□□□ 0.16
CTNNA1-226ENST00000521368 GNAQP50148 359 aa16.05■□□□□ 0.16
CTNNA1-226ENST00000521368 EVCP57679 992 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms