RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 HYAL2Q12891 473 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 G3BP1Q13283 466 aaKnown RBP eCLIP9.8□□□□□ -0.84
SHPRH-208ENST00000520752 DCTN1Q14203 1278 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 ELOA3BQ3SY89 546 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 GORABQ5T7V8 394 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 TTC22Q5TAA0 569 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 TLDC1Q6P9B6 456 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 CWC27Q6UX04 472 aaKnown RBP9.8□□□□□ -0.84
SHPRH-208ENST00000520752 GALNT12Q8IXK2 581 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 CNNM3Q8NE01 707 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 ELOA3Q8NG57 546 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 AFAP1L1Q8TED9 768 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 UBE2OQ9C0C9 1292 aaKnown RBP9.8□□□□□ -0.84
SHPRH-208ENST00000520752 RANBP17Q9H2T7 1088 aaKnown RBP9.8□□□□□ -0.84
SHPRH-208ENST00000520752 IGFLR1Q9H665 355 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 AKAP2Q9Y2D5 859 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 WDR62O43379 1518 aa9.8□□□□□ -0.84
SHPRH-208ENST00000520752 MSH6P52701 1360 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 LOC102724428A0A0B4J2F2 783 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 PNMA6FA0A0J9YX94 578 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 GOLGA6L10A6NI86 522 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 ZSCAN12O43309 604 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 SMARCA5O60264 1052 aaPredicted RBP9.79□□□□□ -0.84
SHPRH-208ENST00000520752 KIAA0754O94854 1291 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 SEC31AO94979 1220 aaKnown RBP9.79□□□□□ -0.84
SHPRH-208ENST00000520752 EPXP11678 715 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 MCM3P25205 808 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 ADH7P40394 386 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 SIK1P57059 783 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 PSMD2Q13200 908 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 COL13A1Q5TAT6 717 aaPredicted RBP9.79□□□□□ -0.84
SHPRH-208ENST00000520752 VPS53Q5VIR6 699 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 USPL1Q5W0Q7 1092 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 ALG1LQ6GMV1 187 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 ARMCX6Q7L4S7 300 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 ITPRIPQ8IWB1 547 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 FBF1Q8TES7 1133 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 ZNF526Q8TF50 670 aaPredicted RBP9.79□□□□□ -0.84
SHPRH-208ENST00000520752 ZFAND2BQ8WV99 257 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 RSRC1Q96IZ7 334 aaKnown RBP9.79□□□□□ -0.84
SHPRH-208ENST00000520752 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 SRCIN1Q9C0H9 1055 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 NRBP1Q9UHY1 535 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 CUL7Q14999 1698 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 NOS1P29475 1434 aa9.79□□□□□ -0.84
SHPRH-208ENST00000520752 YTHDC2Q9H6S0 1430 aaKnown RBP9.79□□□□□ -0.84
SHPRH-208ENST00000520752 DISP3Q9P2K9 1392 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 RBM47A0AV96 593 aaKnown RBP9.78□□□□□ -0.84
SHPRH-208ENST00000520752 USP27XA6NNY8 438 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 WIPF1O43516 503 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 LDHBP07195 334 aaKnown RBP9.78□□□□□ -0.84
SHPRH-208ENST00000520752 LIG3P49916 1009 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 CCDC144BQ3MJ40 725 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 ALDH1L2Q3SY69 923 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 NFXL1Q6ZNB6 911 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 C1orf229Q6ZS94 237 aaPredicted RBP9.78□□□□□ -0.84
SHPRH-208ENST00000520752 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 CCDC146Q8IYE0 955 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 MSANTD4Q8NCY6 345 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 CCDC74AQ96AQ1 378 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 CCDC34Q96HJ3 373 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 PARD6BQ9BYG5 372 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 UBA5Q9GZZ9 404 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 SLC6A14Q9UN76 642 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.78□□□□□ -0.84
SHPRH-208ENST00000520752 RPGRIP1LQ68CZ1 1315 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 NPHP3Q7Z494 1330 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 MAGI2Q86UL8 1455 aa9.78□□□□□ -0.84
SHPRH-208ENST00000520752 PPRC1Q5VV67 1664 aaKnown RBP9.77□□□□□ -0.84
SHPRH-208ENST00000520752 PIK3R4Q99570 1358 aa9.77□□□□□ -0.84
SHPRH-208ENST00000520752 CDC42BPAQ5VT25 1732 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 C9orf84Q5VXU9 1444 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 NPHP1O15259 732 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 OIP5O43482 229 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 F13A1P00488 732 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 BCRP11274 1271 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 EDN3P14138 238 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 TRIM27P14373 513 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 ALAS2P22557 587 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 ZNF165P49910 485 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 ATP2B2Q01814 1243 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 SF3A1Q15459 793 aaKnown RBP9.77□□□□□ -0.85
SHPRH-208ENST00000520752 ANO6Q4KMQ2 910 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 PLEKHO1Q53GL0 409 aaPredicted RBP9.77□□□□□ -0.85
SHPRH-208ENST00000520752 BEND6Q5SZJ8 279 aaPredicted RBP9.77□□□□□ -0.85
SHPRH-208ENST00000520752 CEP85LQ5SZL2 805 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 HHATQ5VTY9 493 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 OR8K1Q8NGG5 319 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 ARHGAP45Q92619 1136 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 CARD6Q9BX69 1037 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 NAT10Q9H0A0 1025 aaKnown RBP9.77□□□□□ -0.85
SHPRH-208ENST00000520752 ACTR5Q9H9F9 607 aaPredicted RBP9.77□□□□□ -0.85
SHPRH-208ENST00000520752 PDE11AQ9HCR9 933 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 RGL1Q9NZL6 768 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 KANSL3Q9P2N6 904 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 BLOC1S6Q9UL45 172 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 L1RE1Q9UN81 338 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 FAN1Q9Y2M0 1017 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 PBRM1Q86U86 1689 aa9.77□□□□□ -0.85
SHPRH-208ENST00000520752 FAM135BQ49AJ0 1406 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms