RNA–Protein interactions for RNA: ENST00000520440.1

STK3-209, Transcript of serine/threonine kinase 3, human

TSL 2

Gene STK3, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK3-209	ENST00000520440	SEPT6	Q14141	434 aa		6.9	□□□□□ -1.3
STK3-209	ENST00000520440	MAPRE1	Q15691	268 aa	Known RBP	6.9	□□□□□ -1.3
STK3-209	ENST00000520440	ZNF648	Q5T619	568 aa	Predicted RBP	6.9	□□□□□ -1.3
STK3-209	ENST00000520440	PRAMEF13	Q5VWM6	474 aa		6.9	□□□□□ -1.3
STK3-209	ENST00000520440	ZSWIM9	Q86XI8	627 aa		6.9	□□□□□ -1.3
STK3-209	ENST00000520440	MRPL41	Q8IXM3	137 aa	Known RBP	6.9	□□□□□ -1.3
STK3-209	ENST00000520440	TTC30B	Q8N4P2	665 aa		6.9	□□□□□ -1.3
STK3-209	ENST00000520440	ATL2	Q8NHH9	583 aa		6.9	□□□□□ -1.3
STK3-209	ENST00000520440	RIN3	Q8TB24	985 aa		6.9	□□□□□ -1.3
STK3-209	ENST00000520440	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	6.9	□□□□□ -1.3
STK3-209	ENST00000520440	ZHX3	Q9H4I2	956 aa		6.9	□□□□□ -1.3
STK3-209	ENST00000520440	INPP5F	Q9Y2H2	1132 aa		6.9	□□□□□ -1.3
STK3-209	ENST00000520440	FAM155A	B1AL88	458 aa	Predicted RBP	6.89	□□□□□ -1.31
STK3-209	ENST00000520440	BPNT1	O95861	308 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	COL6A1	P12109	1028 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	RLBP1	P12271	317 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	SCP2	P22307	547 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	ST13	P50502	369 aa	Known RBP	6.89	□□□□□ -1.31
STK3-209	ENST00000520440	ZRSR2	Q15696	482 aa	Known RBP	6.89	□□□□□ -1.31
STK3-209	ENST00000520440	ERICH6B	Q5W0A0	696 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	CCDC174	Q6PII3	467 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	THAP5	Q7Z6K1	395 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	NOC4L	Q9BVI4	516 aa	Known RBP	6.89	□□□□□ -1.31
STK3-209	ENST00000520440	ATP13A1	Q9HD20	1204 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	PARP2	Q9UGN5	583 aa		6.89	□□□□□ -1.31
STK3-209	ENST00000520440	PLIN1	O60240	522 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	VDR	P11473	427 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	TFE3	P19532	575 aa	Predicted RBP	6.88	□□□□□ -1.31
STK3-209	ENST00000520440	LMNB1	P20700	586 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	KIR3DL1	P43629	444 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	DAB2	P98082	770 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	KCTD2	Q14681	263 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	MEI1	Q5TIA1	1274 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	SAMD3	Q8N6K7	520 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	PPM1E	Q8WY54	764 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	RELT	Q969Z4	430 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	RUNDC1	Q96C34	613 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	CDC5L	Q99459	802 aa	Known RBP	6.88	□□□□□ -1.31
STK3-209	ENST00000520440	MIR1-1HG	Q9H1L0	117 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	RSPH9	Q9H1X1	276 aa	Predicted RBP	6.88	□□□□□ -1.31
STK3-209	ENST00000520440	FAM53C	Q9NYF3	392 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	TJP2	Q9UDY2	1190 aa		6.88	□□□□□ -1.31
STK3-209	ENST00000520440	PUF60	Q9UHX1	559 aa	Known RBP	6.88	□□□□□ -1.31
STK3-209	ENST00000520440	ZNF503-AS2	A6NEH8	195 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	GOLIM4	O00461	696 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	KIF3B	O15066	747 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	CYP7A1	P22680	504 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	AFM	P43652	599 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	MESP2	Q0VG99	397 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	VPS72	Q15906	364 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	ZNF394	Q53GI3	561 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	C10orf62	Q5T681	223 aa	Predicted RBP	6.87	□□□□□ -1.31
STK3-209	ENST00000520440	CDKAL1	Q5VV42	579 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	SLC6A19	Q695T7	634 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	DDX46	Q7L014	1031 aa	Known RBP	6.87	□□□□□ -1.31
STK3-209	ENST00000520440	CCDC84	Q86UT8	332 aa	Predicted RBP	6.87	□□□□□ -1.31
STK3-209	ENST00000520440	DRC7	Q8IY82	874 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	TMEM87B	Q96K49	555 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	KANSL2	Q9H9L4	492 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	CARS2	Q9HA77	564 aa	Known RBP	6.87	□□□□□ -1.31
STK3-209	ENST00000520440	ARNT2	Q9HBZ2	717 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	C19orf73	Q9NVV2	129 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	ADAM30	Q9UKF2	790 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	LZTS1	Q9Y250	596 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	PCDHGB7	Q9Y5F8	929 aa		6.87	□□□□□ -1.31
STK3-209	ENST00000520440	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	CAND2	O75155	1236 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	TERF1	P54274	439 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	RACK1	P63244	317 aa	Known RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	RPL6	Q02878	288 aa	Known RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	HDAC1	Q13547	482 aa	Predicted RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	TAF1C	Q15572	869 aa	Predicted RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	KCNMB1	Q16558	191 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	MAP3K11	Q16584	847 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	L1TD1	Q5T7N2	865 aa	Known RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	MCAT	Q8IVS2	390 aa	Known RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	PAF1	Q8N7H5	531 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	PHC3	Q8NDX5	983 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	NGDN	Q8NEJ9	315 aa	Known RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	PIWIL2	Q8TC59	973 aa	Known RBP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	ANP32E	Q9BTT0	268 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	LRRC27	Q9C0I9	530 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	HOMER2	Q9NSB8	354 aa		6.86	□□□□□ -1.31
STK3-209	ENST00000520440	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	6.86	□□□□□ -1.31
STK3-209	ENST00000520440	USP31	Q70CQ4	1352 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440		H3BS24	57 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	TBX3	O15119	743 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	PGR	P06401	933 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	GDNF	P39905	211 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	PDE4B	Q07343	736 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	SIM2	Q14190	667 aa	Predicted RBP	6.85	□□□□□ -1.31
STK3-209	ENST00000520440	LRRC41	Q15345	812 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	C1QTNF12	Q5T7M4	302 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	FYB2	Q5VWT5	728 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	TMC4	Q7Z404	712 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	CEP89	Q96ST8	783 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	MRS2	Q9HD23	443 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	VTI1B	Q9UEU0	232 aa		6.85	□□□□□ -1.31
STK3-209	ENST00000520440	ANAPC4	Q9UJX5	808 aa		6.85	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms