RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 PNMA6FA0A0J9YX94 578 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 CTNND1O60716 968 aaKnown RBP18.43■□□□□ 0.54
SNHG6-201ENST00000520348 STK38Q15208 465 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 SF3A1Q15459 793 aaKnown RBP18.43■□□□□ 0.54
SNHG6-201ENST00000520348 EARS2Q5JPH6 523 aaKnown RBP18.43■□□□□ 0.54
SNHG6-201ENST00000520348 AXDND1Q5T1B0 1012 aaPredicted RBP18.43■□□□□ 0.54
SNHG6-201ENST00000520348 CCDC183Q5T5S1 534 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 DCAF15Q66K64 600 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 ADALQ6DHV7 355 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 TTBK2Q6IQ55 1244 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 MIGA2Q7L4E1 593 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 ADGRF4Q8IZF3 695 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 GZF1Q9H116 711 aaPredicted RBP18.43■□□□□ 0.54
SNHG6-201ENST00000520348 SH2D4AQ9H788 454 aa18.43■□□□□ 0.54
SNHG6-201ENST00000520348 FAM237AA0A1B0GTK4 181 aa18.42■□□□□ 0.54
SNHG6-201ENST00000520348 PLA2G6O60733 806 aa18.42■□□□□ 0.54
SNHG6-201ENST00000520348 LIG1P18858 919 aa18.42■□□□□ 0.54
SNHG6-201ENST00000520348 CEBPZQ03701 1054 aaKnown RBP18.42■□□□□ 0.54
SNHG6-201ENST00000520348 NBPF12Q5TAG4 269 aaPredicted RBP18.42■□□□□ 0.54
SNHG6-201ENST00000520348 KCTD1Q719H9 257 aa18.42■□□□□ 0.54
SNHG6-201ENST00000520348 HEATR3Q7Z4Q2 680 aa18.42■□□□□ 0.54
SNHG6-201ENST00000520348 ACER1Q8TDN7 264 aa18.42■□□□□ 0.54
SNHG6-201ENST00000520348 VCPKMTQ9H867 229 aa18.42■□□□□ 0.54
SNHG6-201ENST00000520348 PCDHA7Q9UN72 937 aa18.42■□□□□ 0.54
SNHG6-201ENST00000520348 FAM205CA6NFA0 338 aa18.41■□□□□ 0.54
SNHG6-201ENST00000520348 ZBTB5O15062 677 aa18.41■□□□□ 0.54
SNHG6-201ENST00000520348 ADAMTS3O15072 1205 aa18.41■□□□□ 0.54
SNHG6-201ENST00000520348 PPP1R11O60927 126 aaPredicted RBP18.41■□□□□ 0.54
SNHG6-201ENST00000520348 BMP3P12645 472 aa18.41■□□□□ 0.54
SNHG6-201ENST00000520348 LMOD1P29536 600 aaPredicted RBP18.41■□□□□ 0.54
SNHG6-201ENST00000520348 ECE1P42892 770 aa18.41■□□□□ 0.54
SNHG6-201ENST00000520348 JMYQ8N9B5 988 aa18.41■□□□□ 0.54
SNHG6-201ENST00000520348 PIBF1Q8WXW3 757 aa18.41■□□□□ 0.54
SNHG6-201ENST00000520348 ZNF341Q9BYN7 854 aa18.41■□□□□ 0.54
SNHG6-201ENST00000520348 DDX19AQ9NUU7 478 aaKnown RBP18.41■□□□□ 0.54
SNHG6-201ENST00000520348 GOLGA6L4A6NEF3 574 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 GRIN3BO60391 1043 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 BMP15O95972 392 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 GNA11P29992 359 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 NAPAP54920 295 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 KIAA1755Q5JYT7 1200 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 HOMER1Q86YM7 354 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 ENGASEQ8NFI3 743 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 GOPCQ9HD26 462 aa18.4■□□□□ 0.54
SNHG6-201ENST00000520348 NOL7Q9UMY1 257 aaKnown RBP18.4■□□□□ 0.54
SNHG6-201ENST00000520348 SCAF8Q9UPN6 1271 aaKnown RBP18.4■□□□□ 0.54
SNHG6-201ENST00000520348 USP17L10C9JJH3 530 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 ME1P48163 572 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 NOM1Q5C9Z4 860 aaKnown RBP18.39■□□□□ 0.53
SNHG6-201ENST00000520348 NOL9Q5SY16 702 aaKnown RBP18.39■□□□□ 0.53
SNHG6-201ENST00000520348 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.53
SNHG6-201ENST00000520348 TEX2Q8IWB9 1127 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 KIAA1683Q9H0B3 1180 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 PCDHA6Q9UN73 950 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 PCDHB6Q9Y5E3 794 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 PCDHA8Q9Y5H6 950 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 SCN4AP35499 1836 aa18.39■□□□□ 0.53
SNHG6-201ENST00000520348 TRIM75PA6NK02 468 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 CUTAO60888 179 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
SNHG6-201ENST00000520348 PTPREP23469 700 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 CMA1P23946 247 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 SLC16A2P36021 539 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 SYDE2Q5VT97 1194 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 MRPS27Q92552 414 aaKnown RBP18.38■□□□□ 0.53
SNHG6-201ENST00000520348 WDR18Q9BV38 432 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 GOLPH3LQ9H4A5 285 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 VAT1LQ9HCJ6 419 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 CEP131Q9UPN4 1083 aa18.38■□□□□ 0.53
SNHG6-201ENST00000520348 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 SMCO2A6NFE2 343 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 CLK2P49760 499 aaKnown RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 FAM160A1Q05DH4 1040 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 SNW1Q13573 536 aaKnown RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 CDC37Q16543 378 aaPredicted RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 QRICH1Q2TAL8 776 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 TTC38Q5R3I4 469 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 USP50Q70EL3 339 aaPredicted RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 KRT25Q7Z3Z0 450 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 CCAR1Q8IX12 1150 aaKnown RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 SCYL3Q8IZE3 742 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 ZC3H15Q8WU90 426 aaKnown RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 GLIS2Q9BZE0 524 aaPredicted RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 CLSTN2Q9H4D0 955 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 DACT1Q9NYF0 836 aa18.37■□□□□ 0.53
SNHG6-201ENST00000520348 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
SNHG6-201ENST00000520348 WNT7AO00755 349 aa18.36■□□□□ 0.53
SNHG6-201ENST00000520348 NR1I2O75469 434 aa18.36■□□□□ 0.53
SNHG6-201ENST00000520348 INPP5BP32019 993 aa18.36■□□□□ 0.53
SNHG6-201ENST00000520348 ATP2C1P98194 919 aaPredicted RBP18.36■□□□□ 0.53
SNHG6-201ENST00000520348 ORC2Q13416 577 aaPredicted RBP18.36■□□□□ 0.53
SNHG6-201ENST00000520348 SUPT20HL1Q3ZLR7 823 aa18.36■□□□□ 0.53
SNHG6-201ENST00000520348 DPY19L2Q6NUT2 758 aa18.36■□□□□ 0.53
SNHG6-201ENST00000520348 LRSAM1Q6UWE0 723 aa18.36■□□□□ 0.53
SNHG6-201ENST00000520348 PIK3AP1Q6ZUJ8 805 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms