RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 OGFOD1Q8N543 542 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 VGLL2Q8N8G2 317 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 TDRD7Q8NHU6 1098 aaKnown RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 NUDT8Q8WV74 236 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 PIBF1Q8WXW3 757 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 APPBP2Q92624 585 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 BRF1Q92994 677 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 TNFRSF25Q93038 417 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 NGLY1Q96IV0 654 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 ZNF594Q96JF6 807 aaPredicted RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 SUSD3Q96L08 255 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 SPATA32Q96LK8 384 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 SEC62Q99442 399 aaKnown RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 DNAJC2Q99543 621 aaKnown RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 NUP62CLQ9H1M0 184 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 ANKIB1Q9P2G1 1089 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 MKRN1Q9UHC7 482 aaKnown RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 CTNNA3Q9UI47 895 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 CFAP45Q9UL16 551 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 RIPOR2Q9Y4F9 1068 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 MRVI1Q9Y6F6 885 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 NID2Q14112 1375 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 CARMIL3Q8ND23 1372 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 RTL9Q8NET4 1388 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 DOT1LQ8TEK3 1739 aa5.9□□□□□ -1.46
SDC2-204ENST00000519914 A0A1B0GUL6 1792 aa5.9□□□□□ -1.46
SDC2-204ENST00000519914 BCORQ6W2J9 1755 aa5.9□□□□□ -1.46
SDC2-204ENST00000519914 ECM29Q5VYK3 1845 aa5.9□□□□□ -1.46
SDC2-204ENST00000519914 JAK2O60674 1132 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 STARD3NLO95772 234 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 HCLS1P14317 486 aaPredicted RBP5.9□□□□□ -1.47
SDC2-204ENST00000519914 LIG1P18858 919 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 ARID4AP29374 1257 aaPredicted RBP5.9□□□□□ -1.47
SDC2-204ENST00000519914 PDIA3P30101 505 aaKnown RBP5.9□□□□□ -1.47
SDC2-204ENST00000519914 CDC25BP30305 580 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 TYRO3Q06418 890 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 KIAA2012Q0VF49 1180 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 ALX1Q15699 326 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 CCDC57Q2TAC2 916 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 CCDC158Q5M9N0 1113 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 C1orf53Q5VUE5 145 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 GIMAP6Q6P9H5 292 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 SARM1Q6SZW1 724 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 KIF6Q6ZMV9 814 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 NLRP10Q86W26 655 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 MB21D2Q8IYB1 491 aaPredicted RBP5.9□□□□□ -1.47
SDC2-204ENST00000519914 RNF214Q8ND24 703 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 PIGBQ92521 554 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 JARID2Q92833 1246 aaPredicted RBP5.9□□□□□ -1.47
SDC2-204ENST00000519914 OSBP2Q969R2 916 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 PGBD1Q96JS3 809 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 NAP1L5Q96NT1 182 aaPredicted RBP5.9□□□□□ -1.47
SDC2-204ENST00000519914 UBE2OQ9C0C9 1292 aaKnown RBP5.9□□□□□ -1.47
SDC2-204ENST00000519914 TMOD3Q9NYL9 352 aa5.9□□□□□ -1.47
SDC2-204ENST00000519914 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.9□□□□□ -1.47
SDC2-204ENST00000519914 A0A1W2PQ27 194 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 A0A1W2PQ64 194 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 A0A1W2PQD8 194 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 PTPDC1A2A3K4 754 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 M0R2C6 588 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 AP5Z1O43299 807 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 SLIT2O94813 1529 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 CHGBP05060 677 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 CYP19A1P11511 503 aaPredicted RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 NID1P14543 1247 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 FGFR2P21802 821 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 COL5A3P25940 1745 aaPredicted RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 GTF2F1P35269 517 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDC2-204ENST00000519914 ADD2P35612 726 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 IL6STP40189 918 aaPredicted RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 TIMM10P62072 90 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 IFIT5Q13325 482 aaKnown RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 TTF1Q15361 905 aaPredicted RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 UBE3CQ15386 1083 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 FOXD4L6Q3SYB3 417 aaPredicted RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 NKAPLQ5M9Q1 402 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 ZSCAN25Q6NSZ9 544 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 SASS6Q6UVJ0 657 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 FOXD4L3Q6VB84 417 aaPredicted RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 PLA2G4DQ86XP0 818 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 ENGASEQ8NFI3 743 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 DDX54Q8TDD1 881 aaKnown RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 IPO4Q8TEX9 1081 aaKnown RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 TCEANC2Q96MN5 208 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 ZNF396Q96N95 335 aaPredicted RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 UCN2Q96RP3 112 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 MTA3Q9BTC8 594 aa5.89□□□□□ -1.47
SDC2-204ENST00000519914 PUS3Q9BZE2 481 aaKnown RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 GPC6Q9Y625 555 aaPredicted RBP5.89□□□□□ -1.47
SDC2-204ENST00000519914 CASZ1Q86V15 1759 aa5.88□□□□□ -1.47
SDC2-204ENST00000519914 ROBO1Q9Y6N7 1651 aa5.88□□□□□ -1.47
SDC2-204ENST00000519914 A0A0U1RQG5 324 aaPredicted RBP5.88□□□□□ -1.47
SDC2-204ENST00000519914 FAM237AA0A1B0GTK4 181 aa5.88□□□□□ -1.47
SDC2-204ENST00000519914 PALM3A6NDB9 673 aaPredicted RBP5.88□□□□□ -1.47
SDC2-204ENST00000519914 GOLGA6L6A8MZA4 724 aa5.88□□□□□ -1.47
SDC2-204ENST00000519914 DYNC1I1O14576 645 aa5.88□□□□□ -1.47
SDC2-204ENST00000519914 DYRK3O43781 588 aa5.88□□□□□ -1.47
SDC2-204ENST00000519914 ATP9BO43861 1147 aa5.88□□□□□ -1.47
SDC2-204ENST00000519914 LILRB5O75023 590 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms