RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 PRPF38AQ8NAV1 312 aaKnown RBP13.87□□□□□ -0.19
HPS4-218ENST00000519774 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 KCNB2Q92953 911 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 TCEANC2Q96MN5 208 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 MCOLN1Q9GZU1 580 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 PORCNQ9H237 461 aa13.87□□□□□ -0.19
HPS4-218ENST00000519774 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
HPS4-218ENST00000519774 SH2B2O14492 632 aaPredicted RBP13.86□□□□□ -0.19
HPS4-218ENST00000519774 ZBED4O75132 1171 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 SNHG28P0DPA3 235 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 CPA1P15085 419 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 SLC16A2P36021 539 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 SLC4A3P48751 1232 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 TNS4Q8IZW8 715 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 IGDCC4Q8TDY8 1250 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 COA7Q96BR5 231 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 TMEM87BQ96K49 555 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
HPS4-218ENST00000519774 SPATC1LQ9H0A9 340 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 LY9Q9HBG7 655 aa13.86□□□□□ -0.19
HPS4-218ENST00000519774 CCDC69A6NI79 296 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
HPS4-218ENST00000519774 SEC24BO95487 1268 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 MAPK4P31152 587 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 SNAP25P60880 206 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 TMEM132BQ14DG7 1078 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 GPATCH4Q5T3I0 446 aaKnown RBP13.85□□□□□ -0.19
HPS4-218ENST00000519774 SYDE2Q5VT97 1194 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 BLOC1S2Q6QNY1 142 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 REPS2Q8NFH8 660 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 CPVLQ9H3G5 476 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 SRRDQ9UH36 339 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 PLXNB2O15031 1838 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
HPS4-218ENST00000519774 PLA2G6O60733 806 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 GNRH1P01148 92 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 HMGB1P09429 215 aaKnown RBP13.84□□□□□ -0.19
HPS4-218ENST00000519774 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
HPS4-218ENST00000519774 ERCC3P19447 782 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
HPS4-218ENST00000519774 PSMA5P28066 241 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 HOXD10P28358 340 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 FGD1P98174 961 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 PRKCZQ05513 592 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 ASPRV1Q53RT3 343 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 SNRNP48Q6IEG0 339 aaKnown RBP13.84□□□□□ -0.19
HPS4-218ENST00000519774 FBXO46Q6PJ61 603 aaPredicted RBP13.84□□□□□ -0.19
HPS4-218ENST00000519774 DHX32Q7L7V1 743 aaKnown RBP13.84□□□□□ -0.19
HPS4-218ENST00000519774 GPR142Q7Z601 462 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 CATIPQ7Z7H3 387 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 NUP133Q8WUM0 1156 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 MTA3Q9BTC8 594 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 MYL10Q9BUA6 226 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 SLC38A10Q9HBR0 1119 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
HPS4-218ENST00000519774 ZNF214Q9UL59 606 aaPredicted RBP13.84□□□□□ -0.19
HPS4-218ENST00000519774 GABRQQ9UN88 632 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 PTPN22Q9Y2R2 807 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 PTCH2Q9Y6C5 1203 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 WDR19Q8NEZ3 1342 aa13.84□□□□□ -0.19
HPS4-218ENST00000519774 DHX16O60231 1041 aaKnown RBP13.83□□□□□ -0.2
HPS4-218ENST00000519774 STAT3P40763 770 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 EXOSC10Q01780 885 aaKnown RBP13.83□□□□□ -0.2
HPS4-218ENST00000519774 PKN2Q16513 984 aaKnown RBP13.83□□□□□ -0.2
HPS4-218ENST00000519774 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 PLEKHH3Q7Z736 793 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 RIOX2Q8IUF8 465 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 ZNF654Q8IZM8 581 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 RAET1EQ8TD07 263 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 IVNS1ABPQ9Y6Y0 642 aa13.83□□□□□ -0.2
HPS4-218ENST00000519774 DDAH1O94760 285 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 FDX1P10109 184 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 RXRAP19793 462 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 RPS6KB1P23443 525 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 LIFRP42702 1097 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 FLT3LGP49771 235 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 PRMT2P55345 433 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 GRM4Q14833 912 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 TMTC2Q8N394 836 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 STAG2Q8N3U4 1231 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 SHCBP1Q8NEM2 672 aa13.82□□□□□ -0.2
HPS4-218ENST00000519774 KLRF2D3W0D1 207 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 SLC25A27O95847 323 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 TAL1P17542 331 aaPredicted RBP13.81□□□□□ -0.2
HPS4-218ENST00000519774 COPB2P35606 906 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 TROAPQ12815 778 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 Q6ZUG5 572 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 MICU3Q86XE3 530 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms