RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SLC4A3P48751 1232 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 CACNB2Q08289 660 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-219ENST00000518824 COL9A3Q14050 684 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-219ENST00000518824 MAP3K21Q5TCX8 1036 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 STOX1Q6ZVD7 989 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 CYB5R4Q7L1T6 521 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 U2AF1L4Q8WU68 220 aaKnown RBP15.7■□□□□ 0.1
VEGFA-219ENST00000518824 RUFY2Q8WXA3 655 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 DEFB118Q96PH6 123 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.7■□□□□ 0.13e-7■■■■□ 25.9
VEGFA-219ENST00000518824 RNF41Q9H4P4 317 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-219ENST00000518824 PAK6Q9NQU5 681 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-219ENST00000518824 ZSWIM5Q9P217 1185 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 FEM1BQ9UK73 627 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 IGHA2P01877 340 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 PGK2P07205 417 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 HOXC6P09630 235 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
VEGFA-219ENST00000518824 ZKSCAN1P17029 563 aaPredicted RBP15.69■□□□□ 0.1
VEGFA-219ENST00000518824 SLC16A2P36021 539 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 GJA8P48165 433 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 BMP2KLQ5H9B9 411 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 SNRNP48Q6IEG0 339 aaKnown RBP15.69■□□□□ 0.1
VEGFA-219ENST00000518824 ESR2Q92731 530 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 ESYT1Q9BSJ8 1104 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 LSG1Q9H089 658 aaKnown RBP15.69■□□□□ 0.1
VEGFA-219ENST00000518824 MROH8Q9H579 483 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 SLC38A10Q9HBR0 1119 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 GPCPD1Q9NPB8 672 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 CTNNA3Q9UI47 895 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 IVNS1ABPQ9Y6Y0 642 aa15.69■□□□□ 0.1
VEGFA-219ENST00000518824 ZNF536O15090 1300 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 PLXNA1Q9UIW2 1896 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 SGPL1O95470 568 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 PCP11498 1178 aaKnown RBP15.68■□□□□ 0.1
VEGFA-219ENST00000518824 CYP2C19P33261 490 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 STAT2P52630 851 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 TRPV1Q8NER1 839 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 MAP4K1Q92918 833 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 CPVLQ9H3G5 476 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 PRR12Q9ULL5 1215 aa15.68■□□□□ 0.1
VEGFA-219ENST00000518824 RBM8AQ9Y5S9 174 aaKnown RBP15.68■□□□□ 0.1
VEGFA-219ENST00000518824 MKI67P46013 3256 aaKnown RBP15.68■□□□□ 0.1
VEGFA-219ENST00000518824 ZBED4O75132 1171 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 SLC25A27O95847 323 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 PDHBP11177 359 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 IKQ13123 557 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-219ENST00000518824 DPP9Q86TI2 863 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 ENAHQ8N8S7 591 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-219ENST00000518824 AGBL1Q96MI9 1066 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 MMP19Q99542 508 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 TEX13BQ9BXU2 312 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 SENP2Q9HC62 589 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
VEGFA-219ENST00000518824 ATP2A1O14983 1001 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 STRNO43815 780 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 NEFLP07196 543 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 GOLGA8HP0CJ92 632 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 SNHG28P0DPA3 235 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 FCER1AP12319 257 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 PPP4R3BQ5MIZ7 849 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 PRAMEF19Q5SWL8 479 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 CHST3Q7LGC8 479 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 UBE2Q1Q7Z7E8 422 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 FAM160B2Q86V87 743 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 DCAF4Q8WV16 495 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 TTC14Q96N46 770 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 ZSCAN10Q96SZ4 725 aaPredicted RBP15.66■□□□□ 0.1
VEGFA-219ENST00000518824 CRISPLD2Q9H0B8 497 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 HMX1Q9NP08 348 aaPredicted RBP15.66■□□□□ 0.1
VEGFA-219ENST00000518824 U3KPZ7 1027 aaPredicted RBP15.66■□□□□ 0.1
VEGFA-219ENST00000518824 FRMPD3Q5JV73 1810 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 TNKSO95271 1327 aa15.66■□□□□ 0.1
VEGFA-219ENST00000518824 E7EWF7 191 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 PLA2G6O60733 806 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
VEGFA-219ENST00000518824 ZNF543Q08ER8 600 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 SEC23AQ15436 765 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 DIS3LQ8TF46 1054 aaKnown RBP15.65■□□□□ 0.1
VEGFA-219ENST00000518824 CHURC1Q8WUH1 139 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 ANKS1AQ92625 1134 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 MAML3Q96JK9 1138 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 KRT23Q9C075 422 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 HOMER2Q9NSB8 354 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 PDE4DIPQ5VU43 2346 aa15.65■□□□□ 0.1
VEGFA-219ENST00000518824 TFRCP02786 760 aaKnown RBP15.64■□□□□ 0.09
VEGFA-219ENST00000518824 ANTXR2P58335 489 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 ZNF792Q3KQV3 632 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 MUM1L1Q5H9M0 696 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 SYDE2Q5VT97 1194 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 LHX8Q68G74 356 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 BTNL9Q6UXG8 535 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 IQCA1Q86XH1 822 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 DGKHQ86XP1 1220 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 TRMT44Q8IYL2 757 aaKnown RBP15.64■□□□□ 0.09
VEGFA-219ENST00000518824 ABRAQ8N0Z2 381 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 PNMA1Q8ND90 353 aa15.64■□□□□ 0.09
VEGFA-219ENST00000518824 FGD4Q96M96 766 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms