RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 CCDC174Q6PII3 467 aa18.36■□□□□ 0.53
C8orf88-201ENST00000517562 NFXL1Q6ZNB6 911 aa18.36■□□□□ 0.53
C8orf88-201ENST00000517562 CTU1Q7Z7A3 348 aaKnown RBP18.36■□□□□ 0.53
C8orf88-201ENST00000517562 NUP133Q8WUM0 1156 aa18.36■□□□□ 0.53
C8orf88-201ENST00000517562 LARP6Q9BRS8 491 aaKnown RBP18.36■□□□□ 0.53
C8orf88-201ENST00000517562 MOV10L1Q9BXT6 1211 aaKnown RBP18.36■□□□□ 0.53
C8orf88-201ENST00000517562 VAT1LQ9HCJ6 419 aa18.36■□□□□ 0.53
C8orf88-201ENST00000517562 PRR12Q9ULL5 1215 aa18.36■□□□□ 0.53
C8orf88-201ENST00000517562 PLXNB2O15031 1838 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
C8orf88-201ENST00000517562 STAT2P52630 851 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 KRT32Q14532 448 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 SART3Q15020 963 aaKnown RBP18.35■□□□□ 0.53
C8orf88-201ENST00000517562 BLOC1S2Q6QNY1 142 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 REPS2Q8NFH8 660 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 CHURC1Q8WUH1 139 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 MCOLN1Q9GZU1 580 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 SPATC1LQ9H0A9 340 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 RIPK3Q9Y572 518 aa18.35■□□□□ 0.53
C8orf88-201ENST00000517562 TNPO2O14787 897 aaKnown RBP18.34■□□□□ 0.53
C8orf88-201ENST00000517562 ZBED4O75132 1171 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 SNHG28P0DPA3 235 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 NT5C2P49902 561 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 FCGRTP55899 365 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 SYDE2Q5VT97 1194 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 Q6ZUG5 572 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 CCAR1Q8IX12 1150 aaKnown RBP18.34■□□□□ 0.53
C8orf88-201ENST00000517562 TMEM87BQ96K49 555 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 AGBL1Q96MI9 1066 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 UPF3BQ9BZI7 483 aaKnown RBP18.34■□□□□ 0.53
C8orf88-201ENST00000517562 BRPF3Q9ULD4 1205 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 CTDP1Q9Y5B0 961 aaPredicted RBP18.34■□□□□ 0.53
C8orf88-201ENST00000517562 A0A0G2JMZ2 1700 aa18.34■□□□□ 0.53
C8orf88-201ENST00000517562 PARP1P09874 1014 aaKnown RBP18.33■□□□□ 0.52
C8orf88-201ENST00000517562 ERCC3P19447 782 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 STAT3P40763 770 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 PRKCZQ05513 592 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 FAM160B2Q86V87 743 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 NCAPG2Q86XI2 1143 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 ZNF654Q8IZM8 581 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 GTF3C2Q8WUA4 911 aaPredicted RBP18.33■□□□□ 0.52
C8orf88-201ENST00000517562 PIBF1Q8WXW3 757 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 SLC38A10Q9HBR0 1119 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 MAD2L2Q9UI95 211 aa18.33■□□□□ 0.52
C8orf88-201ENST00000517562 NAP1L2Q9ULW6 460 aaPredicted RBP18.33■□□□□ 0.52
C8orf88-201ENST00000517562 MYPNQ86TC9 1320 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 CCDC69A6NI79 296 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 RPS6KB1P23443 525 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 TROAPQ12815 778 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 SLC35G1Q2M3R5 365 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 BTNL9Q6UXG8 535 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 GPR142Q7Z601 462 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 CATIPQ7Z7H3 387 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 NBPF11Q86T75 865 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
C8orf88-201ENST00000517562 SRRDQ9UH36 339 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 ZNF214Q9UL59 606 aaPredicted RBP18.32■□□□□ 0.52
C8orf88-201ENST00000517562 PTPN22Q9Y2R2 807 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
C8orf88-201ENST00000517562 KLRF2D3W0D1 207 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 EPB41L2O43491 1005 aaKnown RBP18.31■□□□□ 0.52
C8orf88-201ENST00000517562 DHX16O60231 1041 aaKnown RBP18.31■□□□□ 0.52
C8orf88-201ENST00000517562 FLT3LGP49771 235 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 CCNA1P78396 465 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 FGD1P98174 961 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 GRM4Q14833 912 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 SNRNP48Q6IEG0 339 aaKnown RBP18.31■□□□□ 0.52
C8orf88-201ENST00000517562 PLEKHH3Q7Z736 793 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 TNS4Q8IZW8 715 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 CMTR1Q8N1G2 835 aaKnown RBP18.31■□□□□ 0.52
C8orf88-201ENST00000517562 MB21D1Q8N884 522 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 COA7Q96BR5 231 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 ZSWIM6Q9HCJ5 1215 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 HOMER2Q9NSB8 354 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 GJD2Q9UKL4 321 aa18.31■□□□□ 0.52
C8orf88-201ENST00000517562 ZNF536O15090 1300 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
C8orf88-201ENST00000517562 PLA2G6O60733 806 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 MYCP01106 439 aaPredicted RBP18.3■□□□□ 0.52
C8orf88-201ENST00000517562 CYP2B6P20813 491 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 PSMA5P28066 241 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 LIFRP42702 1097 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 RUFY3Q7L099 469 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 RIOX2Q8IUF8 465 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 ADGRF4Q8IZF3 695 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 BRF1Q92994 677 aa18.3■□□□□ 0.52
C8orf88-201ENST00000517562 KLF18A0A0U1RQI7 1052 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
C8orf88-201ENST00000517562 ALAS1P13196 640 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 HOXD10P28358 340 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 MAPK4P31152 587 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 ARHGEF6Q15052 776 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 ASPRV1Q53RT3 343 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 GPATCH4Q5T3I0 446 aaKnown RBP18.29■□□□□ 0.52
C8orf88-201ENST00000517562 MICU3Q86XE3 530 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 TMTC2Q8N394 836 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
C8orf88-201ENST00000517562 JMJD4Q9H9V9 463 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms