RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 ZBED4O75132 1171 aa17.41■□□□□ 0.38
SCARNA20.5-201ENST00000516991 APPP05067 770 aa17.41■□□□□ 0.38
SCARNA20.5-201ENST00000516991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCARNA20.5-201ENST00000516991 STK11IPQ8N1F8 1099 aa17.41■□□□□ 0.38
SCARNA20.5-201ENST00000516991 PDLIM7Q9NR12 457 aa17.41■□□□□ 0.38
SCARNA20.5-201ENST00000516991 CLIP2Q9UDT6 1046 aa17.41■□□□□ 0.38
SCARNA20.5-201ENST00000516991 FEM1BQ9UK73 627 aa17.41■□□□□ 0.38
SCARNA20.5-201ENST00000516991 PATL2C9JE40 543 aaKnown RBP17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 M0R2C6 588 aa17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 TTLL1O95922 423 aa17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 SLC3A2P08195 630 aaKnown RBP17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 ZNF865P0CJ78 1059 aaPredicted RBP17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 ZNF467Q7Z7K2 595 aaPredicted RBP17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 GMCL1P1Q8NEA9 526 aa17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 MKL1Q969V6 931 aa17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 FERMT2Q96AC1 680 aa17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 FBXO40Q9UH90 709 aa17.4■□□□□ 0.38
SCARNA20.5-201ENST00000516991 DNAJC25-GNG10A0A024R161 153 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 PGK1P00558 417 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 FDX1P10109 184 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 OAZ1P54368 228 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 PDE4BQ07343 736 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 MAMDC4Q6UXC1 1216 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 IFNL3Q8IZI9 196 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 CEP95Q96GE4 821 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TSEN34Q9BSV6 310 aaKnown RBP17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 FSD1Q9BTV5 496 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SLC38A10Q9HBR0 1119 aa17.39■□□□□ 0.37
SCARNA20.5-201ENST00000516991 PRDM1O75626 825 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TAL1P17542 331 aaPredicted RBP17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TLE2Q04725 743 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 CHST13Q8NET6 341 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 NEDD1Q8NHV4 660 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 PI4K2BQ8TCG2 481 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 KIFC2Q96AC6 838 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 NAPBQ9H115 298 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 FAM184BQ9ULE4 1060 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TACC3Q9Y6A5 838 aa17.38■□□□□ 0.37
SCARNA20.5-201ENST00000516991 A0A1W2PQ45 241 aaPredicted RBP17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 A0A1W2PQY0 241 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 POTEB2H3BUK9 544 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ADAMTS4O75173 837 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 CLTBP09497 229 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TSPY3P0CV98 308 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TSPY8P0CW00 308 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ZMYM1Q5SVZ6 1142 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ZNF697Q5TEC3 545 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 CPXCR1Q8N123 301 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 LRRC47Q8N1G4 583 aaKnown RBP17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 BADQ92934 168 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 RIPK3Q9Y572 518 aa17.37■□□□□ 0.37
SCARNA20.5-201ENST00000516991 MOXD2PA6NHM9 499 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 DLL1O00548 723 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 BMP3P12645 472 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SLFN13Q68D06 897 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 FAM160B2Q86V87 743 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ANKRD35Q8N283 1001 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 RAVER2Q9HCJ3 691 aaKnown RBP17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ZHX1Q9UKY1 873 aaPredicted RBP17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SYNRGQ9UMZ2 1314 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 CUL9Q8IWT3 2517 aa17.36■□□□□ 0.37
SCARNA20.5-201ENST00000516991 MCM3APO60318 1980 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TRIM43BA6NCK2 446 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 DUSP11O75319 330 aaKnown RBP17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SNAI1O95863 264 aaPredicted RBP17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 MX1P20591 662 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SLC4A3P48751 1232 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 STAT2P52630 851 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ACLYP53396 1101 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 PPARAQ07869 468 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SHHQ15465 462 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SH3RF1Q7Z6J0 888 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 CHURC1Q8WUH1 139 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TRIM43Q96BQ3 446 aaPredicted RBP17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 LENG1Q96BZ8 264 aaPredicted RBP17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 GMCL1Q96IK5 515 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ABHD16BQ9H3Z7 469 aa17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ZBTB47Q9UFB7 747 aaPredicted RBP17.35■□□□□ 0.37
SCARNA20.5-201ENST00000516991 KIAA0355O15063 1070 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 PQBP1O60828 265 aaKnown RBP17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 CST5P28325 142 aaPredicted RBP17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SMAD3P84022 425 aaKnown RBP17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TFAP4Q01664 338 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ACVR2BQ13705 512 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ANKRD33Q7Z3H0 272 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 KLHDC9Q8NEP7 349 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 TOX2Q96NM4 488 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SEC62Q99442 399 aaKnown RBP17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 SPC25Q9HBM1 224 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 STARD7Q9NQZ5 370 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 ISY1Q9ULR0 285 aaKnown RBP17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 PCDHB15Q9Y5E8 787 aa17.34■□□□□ 0.37
SCARNA20.5-201ENST00000516991 MROH7Q68CQ1 1323 aa17.33■□□□□ 0.36
SCARNA20.5-201ENST00000516991 DCDC2CA8MYV0 355 aa17.33■□□□□ 0.36
SCARNA20.5-201ENST00000516991 RAG1P15918 1043 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms