RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 ACRP10323 421 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SDSP20132 328 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CD33P20138 364 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 IL2P60568 153 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SETQ01105 290 aaPredicted RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PTPN11Q06124 597 aaPredicted RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SETDB1Q15047 1291 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 POU4F3Q15319 338 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 FAM182BQ5T319 152 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PKN3Q6P5Z2 889 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 LRFN4Q6PJG9 635 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ADAMTSL4Q6UY14 1074 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MAMDC2Q7Z304 686 aaPredicted RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 BRAPQ7Z569 592 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 VN1R5Q7Z5H4 357 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 RAB44Q7Z6P3 723 aaPredicted RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 STRA8Q7Z7C7 330 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 DDX53Q86TM3 631 aaKnown RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PDZD3Q86UT5 571 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZNF227Q86WZ6 799 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ANKLE2Q86XL3 938 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CCDC144CPQ8IYA2 1237 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 AFAP1Q8N556 730 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CNTD1Q8N815 330 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ENAHQ8N8S7 591 aaPredicted RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 STK35Q8TDR2 534 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 JPH3Q8WXH2 748 aaPredicted RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 KCTD13Q8WZ19 329 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 HPS1Q92902 700 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 E2F7Q96AV8 911 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CCDC140Q96MF4 163 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CLUHP3Q96NS8 147 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 HAUS7Q99871 368 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SENP7Q9BQF6 1050 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MENTQ9BUN1 341 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 DNAJB12Q9NXW2 375 aaKnown RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SUCOQ9UBS9 1254 aaKnown RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PNMA2Q9UL42 364 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PNMA8BQ9ULN7 279 aaPredicted RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZKSCAN5Q9Y2L8 839 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 LUC7L2Q9Y383 392 aaKnown RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TNPO3Q9Y5L0 923 aaKnown RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CORINQ9Y5Q5 1042 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MRFAP1Q9Y605 127 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 COL16A1Q07092 1604 aaPredicted RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 RNF17Q9BXT8 1623 aaKnown RBP3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PLA2R1Q13018 1463 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 NEO1Q92859 1461 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 WASHC2AQ641Q2 1341 aa3.4□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PHLPP1O60346 1717 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CEP170BQ9Y4F5 1589 aaPredicted RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 VSTM5A8MXK1 200 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TNFRSF10AO00220 468 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 AQP7O14520 342 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ERC2O15083 957 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 GAS7O60861 476 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ULK1O75385 1050 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 DNAJC8O75937 253 aaPredicted RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ADAMTS2O95450 1211 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TP53P04637 393 aaPredicted RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ITGAVP06756 1048 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 JMJD7P0C870 316 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TRIM27P14373 513 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CPB1P15086 417 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PHKG2P15735 406 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 HSPA6P17066 643 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CD53P19397 219 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 GRK4P32298 578 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PPM1FP49593 454 aaPredicted RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 DGKGP49619 791 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 C19orf57Q0VDD7 668 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PTPN21Q16825 1174 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 C10orf62Q5T681 223 aaPredicted RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PNMA8AQ86V59 439 aaPredicted RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 FCHSD1Q86WN1 690 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 KIF18BQ86Y91 864 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TEX2Q8IWB9 1127 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SMAP1Q8IYB5 467 aaPredicted RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 KCT2Q8NC54 265 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 BVESQ8NE79 360 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PTPRN2Q92932 1015 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 WNT8BQ93098 351 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ABHD17AQ96GS6 310 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 WNK4Q96J92 1243 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CCDC74BQ96LY2 380 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SLC6A18Q96N87 628 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SLC30A3Q99726 388 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 KRTAP3-3Q9BYR6 98 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 KRTAP3-2Q9BYR7 98 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZC3H12CQ9C0D7 883 aaKnown RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MKRN2Q9H000 416 aaKnown RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CCDC8Q9H0W5 538 aaPredicted RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SMG9Q9H0W8 520 aaKnown RBP3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 STRN4Q9NRL3 753 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TOR4AQ9NXH8 423 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 WHRNQ9P202 907 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SWAP70Q9UH65 585 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 IP6K2Q9UHH9 426 aa3.39□□□□□ -1.87
SCARNA17.1-201ENST00000516211 INTUQ9ULD6 942 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms