RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 RTP1P59025 263 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 ADGRF1Q5T601 910 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 TMEM192Q8IY95 271 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 EAF1Q96JC9 268 aaPredicted RBP5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 HHIPL1Q96JK4 782 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 ZNF512BQ96KM6 892 aaPredicted RBP5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 FCRL2Q96LA5 508 aaPredicted RBP5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 SLC6A18Q96N87 628 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 ANTXR1Q9H6X2 564 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 FBXL21Q9UKT6 434 aa5.18□□□□□ -1.58
RNU4-49P-201ENST00000516080 BMP8BP34820 402 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 AUHQ13825 339 aaKnown RBP5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 LDLRAD1Q5T700 205 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 TMCO4Q5TGY1 634 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 OLFML2BQ68BL8 750 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 GALNT18Q6P9A2 607 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 SIRT2Q8IXJ6 389 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 SLC9A7Q96T83 725 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 METTL5Q9NRN9 209 aaKnown RBP5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 SUCOQ9UBS9 1254 aaKnown RBP5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 RAPGEFL1Q9UHV5 662 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 ZNRF3Q9ULT6 936 aa5.17□□□□□ -1.58
RNU4-49P-201ENST00000516080 ZBTB7CA1YPR0 619 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 WTIPA6NIX2 430 aaPredicted RBP5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 ABLIM1O14639 778 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 GALK1P51570 392 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 USP48Q86UV5 1035 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 TAB3Q8N5C8 712 aaPredicted RBP5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 BACH2Q9BYV9 841 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 IRF2BPLQ9H1B7 796 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 GFOD1Q9NXC2 390 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 CNOT6Q9ULM6 557 aaKnown RBP5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 TAF6LQ9Y6J9 622 aa5.16□□□□□ -1.58
RNU4-49P-201ENST00000516080 FADS2P1A8MWK0 482 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 RFXAPO00287 272 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 ZNF205O95201 554 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 GSNP06396 782 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 VAV1P15498 845 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 ARL4AP40617 200 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 LAPTM5Q13571 262 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 ZNF385BQ569K4 471 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 ZPBP2Q6X784 338 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 TTLL10Q6ZVT0 673 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 CCDC144CPQ8IYA2 1237 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 C7orf61Q8IZ16 206 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 SMARCC1Q92922 1105 aaPredicted RBP5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 FERD3LQ96RJ6 166 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 TM9SF2Q99805 663 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 CDADC1Q9BWV3 514 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 GCM1Q9NP62 436 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 SIRT5Q9NXA8 310 aa5.15□□□□□ -1.59
RNU4-49P-201ENST00000516080 A0A1W2PQ45 241 aaPredicted RBP5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 A0A1W2PQY0 241 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 MEIS1O00470 390 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 EFEMP2O95967 443 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 MPOP05164 745 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 ACRP10323 421 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 CTSKP43235 329 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 PMS1P54277 932 aaKnown RBP5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 ERVFRD-1P60508 538 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 YBX1P67809 324 aaKnown RBP5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 SRSF3P84103 164 aaKnown RBP5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 FANCCQ00597 558 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 TMEM62Q0P6H9 643 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 HSF5Q4G112 596 aaPredicted RBP5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 CWF19L1Q69YN2 538 aaKnown RBP5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 LILRA6Q6PI73 481 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 TMEM151BQ8IW70 566 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 DSCC1Q9BVC3 393 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 SGPP1Q9BX95 441 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 ERVK13-1Q9NX77 482 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 MINPP1Q9UNW1 487 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 KCTD3Q9Y597 815 aa5.14□□□□□ -1.59
RNU4-49P-201ENST00000516080 ANKRD39Q53RE8 183 aa5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 TCERG1LQ5VWI1 586 aa5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 SLCO6A1Q86UG4 719 aa5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 RBBP8NLQ8NC74 664 aaPredicted RBP5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 RNF34Q969K3 372 aa5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 SIGLEC10Q96LC7 697 aa5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 PLCD4Q9BRC7 762 aa5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 MBD1Q9UIS9 605 aaPredicted RBP5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 GPR55Q9Y2T6 319 aaPredicted RBP5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 IRAK3Q9Y616 596 aa5.13□□□□□ -1.59
RNU4-49P-201ENST00000516080 FAM86C2PA6NEL3 165 aa5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 VIPR1P32241 457 aa5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 CYP4F8P98187 520 aa5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 COL9A2Q14055 689 aaPredicted RBP5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 ZNF394Q53GI3 561 aa5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 NOL9Q5SY16 702 aaKnown RBP5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 FBXW10Q5XX13 1052 aa5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 CRTC3Q6UUV7 619 aa5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 AP5S1Q9NUS5 200 aa5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 ACSL6Q9UKU0 697 aa5.12□□□□□ -1.59
RNU4-49P-201ENST00000516080 C9IYK1 514 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 N4BP3O15049 544 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 SHOXO15266 292 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 INHBBP09529 407 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 PRKCAP17252 672 aa5.11□□□□□ -1.59
RNU4-49P-201ENST00000516080 GUCY2CP25092 1073 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms