RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 LBX2Q6XYB7 198 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 PRPF38AQ8NAV1 312 aaKnown RBP11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 GPRC5AQ8NFJ5 357 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 CHURC1Q8WUH1 139 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 BRF1Q92994 677 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 KIF2CQ99661 725 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 TM6SF1Q9BZW5 370 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 PORCNQ9H237 461 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 PDRG1Q9NUG6 133 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 MAD2L2Q9UI95 211 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 PRR12Q9ULL5 1215 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 NAP1L2Q9ULW6 460 aaPredicted RBP11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 ADAMTS5Q9UNA0 930 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 SMCHD1A6NHR9 2005 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 KLF18A0A0U1RQI7 1052 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 PALM3A6NDB9 673 aaPredicted RBP11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 PSMC4P43686 418 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 STAT2P52630 851 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 ANAPC15P60006 121 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 ERVK-9P63128 1117 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 ERVK-24P63145 666 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 TOB2Q14106 344 aaPredicted RBP11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 CPXCR1Q8N123 301 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 CMTR1Q8N1G2 835 aaKnown RBP11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 TMTC2Q8N394 836 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 REPS2Q8NFH8 660 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 EFCC1Q9HA90 598 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 MORF4L1Q9UBU8 362 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 RABGAP1Q9Y3P9 1069 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 ZSWIM8A7E2V4 1837 aa11.35□□□□□ -0.59
SCARNA16-201ENST00000515981 KLRF2D3W0D1 207 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 ZBED4O75132 1171 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 LACTBP83111 547 aaPredicted RBP11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 NOL8Q76FK4 1167 aaKnown RBP11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 SGMS1Q86VZ5 419 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 MICU3Q86XE3 530 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 ADGRF4Q8IZF3 695 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 PIBF1Q8WXW3 757 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 AGBL1Q96MI9 1066 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 MOV10L1Q9BXT6 1211 aaKnown RBP11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 SLC38A10Q9HBR0 1119 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 RIPK3Q9Y572 518 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 PARP14Q460N5 1801 aa11.34□□□□□ -0.59
SCARNA16-201ENST00000515981 DHX16O60231 1041 aaKnown RBP11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 PLA2G6O60733 806 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 DTNBO60941 627 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 DDAH1O94760 285 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 PLEKHA8P1O95397 391 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 STAT3P40763 770 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 RBM25P49756 843 aaKnown RBP11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 NEK4P51957 841 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 ASPRV1Q53RT3 343 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 GPATCH4Q5T3I0 446 aaKnown RBP11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 WDR78Q5VTH9 848 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 APOA5Q6Q788 366 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 SYNE3Q6ZMZ3 975 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 CCDC82Q8N4S0 544 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 FANCBQ8NB91 859 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 GTF3C2Q8WUA4 911 aaPredicted RBP11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 ERO1AQ96HE7 468 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 SPATC1LQ9H0A9 340 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 JMJD4Q9H9V9 463 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 FAM217BQ9NTX9 383 aaPredicted RBP11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 ZNF214Q9UL59 606 aaPredicted RBP11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 CTDP1Q9Y5B0 961 aaPredicted RBP11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 ZNF536O15090 1300 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 MYPNQ86TC9 1320 aa11.33□□□□□ -0.6
SCARNA16-201ENST00000515981 COL11A1P12107 1806 aaPredicted RBP11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 hCG_1642624A0A1W2PR95 340 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 ZBTB43O43298 467 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 CYTH3O43739 400 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 ERCC3P19447 782 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 CDC27P30260 824 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 ADD1P35611 737 aaKnown RBP11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 AK2P54819 239 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 SNRNP48Q6IEG0 339 aaKnown RBP11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 NCAPG2Q86XI2 1143 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 CCAR1Q8IX12 1150 aaKnown RBP11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 SRBD1Q8N5C6 995 aaKnown RBP11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 MB21D1Q8N884 522 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 TBC1D32Q96NH3 1257 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 AGXT2Q9BYV1 514 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 RANBP17Q9H2T7 1088 aaKnown RBP11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 UPF2Q9HAU5 1272 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms