RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 LRRC2Q9BYS8 371 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 SENP2Q9HC62 589 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 TXNRD2Q9NNW7 524 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 PRR12Q9ULL5 1215 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 SLC12A7Q9Y666 1083 aa13.9□□□□□ -0.18
SNF8-215ENST00000515572 ZBED4O75132 1171 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 CPA1P15085 419 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 KIF5BP33176 963 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 OAZ1P54368 228 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 FCGRTP55899 365 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 POTEEQ6S8J3 1075 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
SNF8-215ENST00000515572 RASGRP2Q7LDG7 609 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 CTCFLQ8NI51 663 aaPredicted RBP13.89□□□□□ -0.19
SNF8-215ENST00000515572 CD99L2Q8TCZ2 262 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 TCEANC2Q96MN5 208 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 AGXT2Q9BYV1 514 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 C22orf23Q9BZE7 217 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 SLC38A10Q9HBR0 1119 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
SNF8-215ENST00000515572 BTBD7Q9P203 1132 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 PNMA2Q9UL42 364 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
SNF8-215ENST00000515572 MYH6P13533 1939 aa13.89□□□□□ -0.19
SNF8-215ENST00000515572 ZSWIM8A7E2V4 1837 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
SNF8-215ENST00000515572 ATP2A1O14983 1001 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 CNMDO75829 334 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 MAPK4P31152 587 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 COPB2P35606 906 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 RBM25P49756 843 aaKnown RBP13.88□□□□□ -0.19
SNF8-215ENST00000515572 RCAN1P53805 252 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 SYDE2Q5VT97 1194 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 TTBK2Q6IQ55 1244 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 Q6ZUG5 572 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 CCAR1Q8IX12 1150 aaKnown RBP13.88□□□□□ -0.19
SNF8-215ENST00000515572 SHCBP1Q8NEM2 672 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 REPS2Q8NFH8 660 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 TEX13BQ9BXU2 312 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 BACH2Q9BYV9 841 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 UPF3BQ9BZI7 483 aaKnown RBP13.88□□□□□ -0.19
SNF8-215ENST00000515572 SPATC1LQ9H0A9 340 aa13.88□□□□□ -0.19
SNF8-215ENST00000515572 ZNF214Q9UL59 606 aaPredicted RBP13.88□□□□□ -0.19
SNF8-215ENST00000515572 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
SNF8-215ENST00000515572 SLC25A27O95847 323 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 SLC16A2P36021 539 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 PSMC4P43686 418 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 GNAQP50148 359 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 PRMT2P55345 433 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 PLS1Q14651 629 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 PPP2R5BQ15173 497 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 Q3C1V9 767 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 BRF1Q92994 677 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 RANBP17Q9H2T7 1088 aaKnown RBP13.87□□□□□ -0.19
SNF8-215ENST00000515572 MROH8Q9H579 483 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 PDRG1Q9NUG6 133 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
SNF8-215ENST00000515572 ZNF236Q9UL36 1845 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 KLF18A0A0U1RQI7 1052 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 TNPO2O14787 897 aaKnown RBP13.86□□□□□ -0.19
SNF8-215ENST00000515572 ZBTB43O43298 467 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 PEX10O60683 326 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 HOXD10P28358 340 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 SMARCA1P28370 1054 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 STAT3P40763 770 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 EVCP57679 992 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 PKN2Q16513 984 aaKnown RBP13.86□□□□□ -0.19
SNF8-215ENST00000515572 CTU1Q7Z7A3 348 aaKnown RBP13.86□□□□□ -0.19
SNF8-215ENST00000515572 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 STAG2Q8N3U4 1231 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 FANCBQ8NB91 859 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 COA7Q96BR5 231 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 LZTS2Q9BRK4 669 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
SNF8-215ENST00000515572 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
SNF8-215ENST00000515572 EFCC1Q9HA90 598 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 BRPF3Q9ULD4 1205 aa13.86□□□□□ -0.19
SNF8-215ENST00000515572 DHX16O60231 1041 aaKnown RBP13.85□□□□□ -0.19
SNF8-215ENST00000515572 ANKRD1Q15327 319 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 SNRNP48Q6IEG0 339 aaKnown RBP13.85□□□□□ -0.19
SNF8-215ENST00000515572 OTOP1Q7RTM1 612 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 ARHGAP39Q9C0H5 1083 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 PORCNQ9H237 461 aa13.85□□□□□ -0.19
SNF8-215ENST00000515572 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
SNF8-215ENST00000515572 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms