RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 SNRNP48Q6IEG0 339 aaKnown RBP22■■□□□ 1.11
SPOP-220ENST00000515508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22■■□□□ 1.11
SPOP-220ENST00000515508 MKNK2Q9HBH9 465 aa22■■□□□ 1.11
SPOP-220ENST00000515508 SYNGAP1Q96PV0 1343 aa22■■□□□ 1.11
SPOP-220ENST00000515508 DNAJC25-GNG10A0A024R161 153 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 A0A1W2PQ45 241 aaPredicted RBP21.99■■□□□ 1.11
SPOP-220ENST00000515508 A0A1W2PQY0 241 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 RNF113AO15541 343 aaKnown RBP21.99■■□□□ 1.11
SPOP-220ENST00000515508 GPAA1O43292 621 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 ZFYP08048 801 aaPredicted RBP21.99■■□□□ 1.11
SPOP-220ENST00000515508 MAMDC4Q6UXC1 1216 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 PRPF38AQ8NAV1 312 aaKnown RBP21.99■■□□□ 1.11
SPOP-220ENST00000515508 GPATCH3Q96I76 525 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 DCTPP1Q9H773 170 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 SYNPO2Q9UMS6 1093 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 CNPY2Q9Y2B0 182 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 RIPK3Q9Y572 518 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 TACC3Q9Y6A5 838 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 PLIN4Q96Q06 1357 aa21.99■■□□□ 1.11
SPOP-220ENST00000515508 MINDY4BA8MYZ0 360 aa21.98■■□□□ 1.11
SPOP-220ENST00000515508 CLTBP09497 229 aa21.98■■□□□ 1.11
SPOP-220ENST00000515508 GNAT2P19087 354 aa21.98■■□□□ 1.11
SPOP-220ENST00000515508 LENG1Q96BZ8 264 aaPredicted RBP21.98■■□□□ 1.11
SPOP-220ENST00000515508 ITGB8P26012 769 aa21.97■■□□□ 1.11
SPOP-220ENST00000515508 TSHZ3Q63HK5 1081 aa21.97■■□□□ 1.11
SPOP-220ENST00000515508 ZNF467Q7Z7K2 595 aaPredicted RBP21.97■■□□□ 1.11
SPOP-220ENST00000515508 STK11IPQ8N1F8 1099 aa21.97■■□□□ 1.11
SPOP-220ENST00000515508 MKL1Q969V6 931 aa21.97■■□□□ 1.11
SPOP-220ENST00000515508 FAM161BQ96MY7 647 aa21.97■■□□□ 1.11
SPOP-220ENST00000515508 TSEN34Q9BSV6 310 aaKnown RBP21.97■■□□□ 1.11
SPOP-220ENST00000515508 ZNF287Q9HBT7 754 aa21.97■■□□□ 1.11
SPOP-220ENST00000515508 SYNRGQ9UMZ2 1314 aa21.97■■□□□ 1.11
SPOP-220ENST00000515508 MCM3APO60318 1980 aa21.96■■□□□ 1.11
SPOP-220ENST00000515508 M0R2C6 588 aa21.96■■□□□ 1.11
SPOP-220ENST00000515508 KIAA0355O15063 1070 aa21.96■■□□□ 1.11
SPOP-220ENST00000515508 SNAI1O95863 264 aaPredicted RBP21.96■■□□□ 1.11
SPOP-220ENST00000515508 TDO2P48775 406 aa21.96■■□□□ 1.11
SPOP-220ENST00000515508 SMAD3P84022 425 aaKnown RBP21.96■■□□□ 1.11
SPOP-220ENST00000515508 CEP95Q96GE4 821 aa21.96■■□□□ 1.11
SPOP-220ENST00000515508 SLC38A10Q9HBR0 1119 aa21.96■■□□□ 1.11
SPOP-220ENST00000515508 MTMR4Q9NYA4 1195 aa21.96■■□□□ 1.11
SPOP-220ENST00000515508 CLIP2Q9UDT6 1046 aa21.96■■□□□ 1.11
SPOP-220ENST00000515508 ANKRD33Q7Z3H0 272 aa21.95■■□□□ 1.1
SPOP-220ENST00000515508 GMCL1P1Q8NEA9 526 aa21.95■■□□□ 1.1
SPOP-220ENST00000515508 KLHDC9Q8NEP7 349 aa21.95■■□□□ 1.1
SPOP-220ENST00000515508 DDX11Q96FC9 970 aa21.95■■□□□ 1.1
SPOP-220ENST00000515508 FAM184BQ9ULE4 1060 aa21.95■■□□□ 1.1
SPOP-220ENST00000515508 PQBP1O60828 265 aaKnown RBP21.94■■□□□ 1.1
SPOP-220ENST00000515508 ZBED4O75132 1171 aa21.94■■□□□ 1.1
SPOP-220ENST00000515508 PRDM1O75626 825 aa21.94■■□□□ 1.1
SPOP-220ENST00000515508 ACLYP53396 1101 aa21.94■■□□□ 1.1
SPOP-220ENST00000515508 OAZ1P54368 228 aa21.94■■□□□ 1.1
SPOP-220ENST00000515508 CCSAPQ6IQ19 270 aaPredicted RBP21.94■■□□□ 1.1
SPOP-220ENST00000515508 ZNF444Q8N0Y2 327 aaPredicted RBP21.94■■□□□ 1.1
SPOP-220ENST00000515508 TOX2Q96NM4 488 aa21.94■■□□□ 1.1
SPOP-220ENST00000515508 FEM1BQ9UK73 627 aa21.94■■□□□ 1.1
SPOP-220ENST00000515508 VCANP13611 3396 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 MOXD2PA6NHM9 499 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 PATL2C9JE40 543 aaKnown RBP21.93■■□□□ 1.1
SPOP-220ENST00000515508 TTLL1O95922 423 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 CST5P28325 142 aaPredicted RBP21.93■■□□□ 1.1
SPOP-220ENST00000515508 LRRFIP1Q32MZ4 808 aaKnown RBP21.93■■□□□ 1.1
SPOP-220ENST00000515508 TTC41PQ6P2S7 1318 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.93■■□□□ 1.1
SPOP-220ENST00000515508 IFNL3Q8IZI9 196 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 CPXCR1Q8N123 301 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 NUP133Q8WUM0 1156 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 PRUNE2Q8WUY3 3088 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 KIFC2Q96AC6 838 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 FGD4Q96M96 766 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 RAVER2Q9HCJ3 691 aaKnown RBP21.93■■□□□ 1.1
SPOP-220ENST00000515508 STARD7Q9NQZ5 370 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 FBXO40Q9UH90 709 aa21.93■■□□□ 1.1
SPOP-220ENST00000515508 ZHX1Q9UKY1 873 aaPredicted RBP21.93■■□□□ 1.1
SPOP-220ENST00000515508 DUSP11O75319 330 aaKnown RBP21.92■■□□□ 1.1
SPOP-220ENST00000515508 APPP05067 770 aa21.92■■□□□ 1.1
SPOP-220ENST00000515508 RAG1P15918 1043 aa21.92■■□□□ 1.1
SPOP-220ENST00000515508 FAAP100Q0VG06 881 aa21.92■■□□□ 1.1
SPOP-220ENST00000515508 LRRC47Q8N1G4 583 aaKnown RBP21.92■■□□□ 1.1
SPOP-220ENST00000515508 CHST13Q8NET6 341 aa21.92■■□□□ 1.1
SPOP-220ENST00000515508 CDX2Q99626 313 aaPredicted RBP21.92■■□□□ 1.1
SPOP-220ENST00000515508 SEMA6BQ9H3T3 888 aa21.92■■□□□ 1.1
SPOP-220ENST00000515508 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.92■■□□□ 1.1
SPOP-220ENST00000515508 CTDP1Q9Y5B0 961 aaPredicted RBP21.92■■□□□ 1.1
SPOP-220ENST00000515508 LRRC37A2A6NM11 1700 aa21.92■■□□□ 1.1
SPOP-220ENST00000515508 ADCY6O43306 1168 aa21.91■■□□□ 1.1
SPOP-220ENST00000515508 EPHB4P54760 987 aa21.91■■□□□ 1.1
SPOP-220ENST00000515508 ACVR2BQ13705 512 aa21.91■■□□□ 1.1
SPOP-220ENST00000515508 NEDD1Q8NHV4 660 aa21.91■■□□□ 1.1
SPOP-220ENST00000515508 PI4K2BQ8TCG2 481 aa21.91■■□□□ 1.1
SPOP-220ENST00000515508 RNPC3Q96LT9 517 aaKnown RBP21.91■■□□□ 1.1
SPOP-220ENST00000515508 TTYH1Q9H313 450 aaPredicted RBP21.91■■□□□ 1.1
SPOP-220ENST00000515508 ABHD16BQ9H3Z7 469 aa21.91■■□□□ 1.1
SPOP-220ENST00000515508 MYADML2A6NDP7 307 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 TSPY3P0CV98 308 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 TSPY8P0CW00 308 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 FDX1P10109 184 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 FPGSQ05932 587 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 PDE4BQ07343 736 aa21.9■■□□□ 1.1
SPOP-220ENST00000515508 KCNA10Q16322 511 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms