RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 STX6O43752 255 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 PLA2G6O60733 806 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 PDCP20941 246 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 STAT2P52630 851 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 PFKFB3Q16875 520 aaPredicted RBP19.46■□□□□ 0.71
AP3S1-208ENST00000515066 PRRT2Q7Z6L0 340 aaPredicted RBP19.46■□□□□ 0.71
AP3S1-208ENST00000515066 SLC10A4Q96EP9 437 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 PIGSQ96S52 555 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 FBXO28Q9NVF7 368 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 KIF3AQ9Y496 699 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 CXCL11O14625 94 aa19.45■□□□□ 0.7
AP3S1-208ENST00000515066 SYDE2Q5VT97 1194 aa19.45■□□□□ 0.7
AP3S1-208ENST00000515066 VAT1LQ9HCJ6 419 aa19.45■□□□□ 0.7
AP3S1-208ENST00000515066 CHMP5Q9NZZ3 219 aa19.45■□□□□ 0.7
AP3S1-208ENST00000515066 RBM27Q9P2N5 1060 aaKnown RBP19.45■□□□□ 0.7
AP3S1-208ENST00000515066 BRD1O95696 1058 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 SCG2P13521 617 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 FOSBP53539 338 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 HUNKP57058 714 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 AKAP17AQ02040 695 aaKnown RBP19.44■□□□□ 0.7
AP3S1-208ENST00000515066 MOGSQ13724 837 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 OTUD7BQ6GQQ9 843 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 SAPCD2Q86UD0 394 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 HOMER1Q86YM7 354 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 WNK4Q96J92 1243 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 RPAP3Q9H6T3 665 aaPredicted RBP19.44■□□□□ 0.7
AP3S1-208ENST00000515066 PRR12Q9ULL5 1215 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 MTMR6Q9Y217 621 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 A0A0G2JMZ2 1700 aa19.44■□□□□ 0.7
AP3S1-208ENST00000515066 FBXO18Q8NFZ0 1043 aa19.43■□□□□ 0.7
AP3S1-208ENST00000515066 WASF1Q92558 559 aa19.43■□□□□ 0.7
AP3S1-208ENST00000515066 RRP36Q96EU6 259 aaKnown RBP19.43■□□□□ 0.7
AP3S1-208ENST00000515066 FEM1BQ9UK73 627 aa19.43■□□□□ 0.7
AP3S1-208ENST00000515066 PPP1R11O60927 126 aaPredicted RBP19.43■□□□□ 0.7
AP3S1-208ENST00000515066 IKQ13123 557 aaPredicted RBP19.43■□□□□ 0.7
AP3S1-208ENST00000515066 WWC2Q6AWC2 1192 aa19.43■□□□□ 0.7
AP3S1-208ENST00000515066 TYW1BQ6NUM6 668 aa19.43■□□□□ 0.7
AP3S1-208ENST00000515066 CHURC1Q8WUH1 139 aa19.43■□□□□ 0.7
AP3S1-208ENST00000515066 GPKOWQ92917 476 aaPredicted RBP eCLIP19.43■□□□□ 0.7
AP3S1-208ENST00000515066 C8orf76Q96K31 380 aa19.43■□□□□ 0.7
AP3S1-208ENST00000515066 TMOD4Q9NZQ9 345 aa19.43■□□□□ 0.7
AP3S1-208ENST00000515066 ZBTB5O15062 677 aa19.42■□□□□ 0.7
AP3S1-208ENST00000515066 GUCY1B3Q02153 619 aa19.42■□□□□ 0.7
AP3S1-208ENST00000515066 CDC37Q16543 378 aaPredicted RBP19.42■□□□□ 0.7
AP3S1-208ENST00000515066 TREML2Q5T2D2 321 aa19.42■□□□□ 0.7
AP3S1-208ENST00000515066 FAM160B2Q86V87 743 aa19.42■□□□□ 0.7
AP3S1-208ENST00000515066 PROCA1Q8NCQ7 364 aaPredicted RBP19.42■□□□□ 0.7
AP3S1-208ENST00000515066 TANGO6Q9C0B7 1094 aa19.42■□□□□ 0.7
AP3S1-208ENST00000515066 VPS54Q9P1Q0 977 aa19.42■□□□□ 0.7
AP3S1-208ENST00000515066 PNMA6FA0A0J9YX94 578 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 VPS37CA5D8V6 355 aaPredicted RBP19.41■□□□□ 0.7
AP3S1-208ENST00000515066 NUCB2P80303 420 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 FSTL1Q12841 308 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 QRICH1Q2TAL8 776 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 KRT40Q6A162 431 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 RGS22Q8NE09 1264 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 KIFC2Q96AC6 838 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 MS4A4AQ96JQ5 239 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 SLF1Q9BQI6 1058 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 SEC63Q9UGP8 760 aaKnown RBP19.41■□□□□ 0.7
AP3S1-208ENST00000515066 TLL2Q9Y6L7 1015 aa19.41■□□□□ 0.7
AP3S1-208ENST00000515066 FLOT1O75955 427 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 SNAP25P60880 206 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 SPRYD7Q5W111 196 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 CATSPERGQ6ZRH7 1159 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 RANBP17Q9H2T7 1088 aaKnown RBP19.4■□□□□ 0.7
AP3S1-208ENST00000515066 BARHL2Q9NY43 387 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 PPP1R9AQ9ULJ8 1098 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 WDR33Q9C0J8 1336 aaKnown RBP19.4■□□□□ 0.7
AP3S1-208ENST00000515066 STXBP3O00186 592 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 ZSCAN22P10073 491 aaPredicted RBP19.4■□□□□ 0.7
AP3S1-208ENST00000515066 ZBTB48P10074 688 aaPredicted RBP19.4■□□□□ 0.7
AP3S1-208ENST00000515066 PDIA4P13667 645 aaKnown RBP19.4■□□□□ 0.7
AP3S1-208ENST00000515066 SNAPC2Q13487 334 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 NPY5RQ15761 445 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 HEATR3Q7Z4Q2 680 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 PRPF38AQ8NAV1 312 aaKnown RBP19.4■□□□□ 0.7
AP3S1-208ENST00000515066 KCNJ14Q9UNX9 436 aa19.4■□□□□ 0.7
AP3S1-208ENST00000515066 PCNTO95613 3336 aa19.39■□□□□ 0.7
AP3S1-208ENST00000515066 H3BQV1 296 aa19.39■□□□□ 0.69
AP3S1-208ENST00000515066 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
AP3S1-208ENST00000515066 IFFO2Q5TF58 517 aa19.39■□□□□ 0.69
AP3S1-208ENST00000515066 FOXD4L5Q5VV16 416 aaPredicted RBP19.39■□□□□ 0.69
AP3S1-208ENST00000515066 GADL1Q6ZQY3 521 aa19.39■□□□□ 0.69
AP3S1-208ENST00000515066 RASAL3Q86YV0 1011 aa19.39■□□□□ 0.69
AP3S1-208ENST00000515066 FOXD4L4Q8WXT5 416 aaPredicted RBP19.39■□□□□ 0.69
AP3S1-208ENST00000515066 PHF20Q9BVI0 1012 aa19.39■□□□□ 0.69
AP3S1-208ENST00000515066 SH3GLB2Q9NR46 395 aa19.39■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L15C9J2P7 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L13C9JLJ4 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L11C9JVI0 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L18D6R9N7 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L22D6RA61 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L17D6RBQ6 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L19D6RCP7 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L20D6RJB6 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 MMP1P03956 469 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 HOXA7P31268 230 aaPredicted RBP19.38■□□□□ 0.69
AP3S1-208ENST00000515066 USP17L24Q0WX57 530 aa19.38■□□□□ 0.69
AP3S1-208ENST00000515066 GPAT2Q6NUI2 795 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms